RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 C1orf185Q5T7R7 199 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 ATG16L1Q676U5 607 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 C11orf87Q6NUJ2 197 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 H3F3CQ6NXT2 135 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 FIGLAQ6QHK4 219 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 TTLL10Q6ZVT0 673 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 SPATA21Q7Z572 469 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 THOC6Q86W42 341 aaKnown RBP6.09□□□□□ -1.43
LDHA-223ENST00000545215 C17orf64Q86WR6 236 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 NUDCD3Q8IVD9 361 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 CCDC28AQ8IWP9 274 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 LRRC56Q8IYG6 542 aaPredicted RBP6.09□□□□□ -1.43
LDHA-223ENST00000545215 DNAJC22Q8N4W6 341 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 FITM2Q8N6M3 262 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 PTGR2Q8N8N7 351 aaPredicted RBP6.09□□□□□ -1.43
LDHA-223ENST00000545215 LINC01555Q8NAE3 123 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 TTLQ8NG68 377 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 ZFP28Q8NHY6 868 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 DENND1AQ8TEH3 1009 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 UBE2E3Q969T4 207 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 PIK3IP1Q96FE7 263 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 THOC1Q96FV9 657 aaKnown RBP6.09□□□□□ -1.43
LDHA-223ENST00000545215 ZNF354BQ96LW1 612 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 IL17FQ96PD4 163 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 SELENOSQ9BQE4 189 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 RHNO1Q9BSD3 238 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 EFCAB11Q9BUY7 163 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 PELI2Q9HAT8 420 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 PFDN4Q9NQP4 134 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 CIDEBQ9UHD4 219 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 EMCNQ9ULC0 261 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 PTGDR2Q9Y5Y4 395 aa6.09□□□□□ -1.43
LDHA-223ENST00000545215 EML6Q6ZMW3 1958 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 IGHV4-30-2A0A087WSY4 118 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 NCF1BA6NI72 391 aaPredicted RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 NCF1CA8MVU1 366 aaPredicted RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 TMEM114B3SHH9 223 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 G3V2L1 256 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 TXNDC9O14530 226 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 FFAR3O14843 346 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 KLF11O14901 512 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 OR10H2O60403 315 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 CCNT2O60583 730 aaKnown RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 E2F6O75461 281 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 SUPT7LO94864 414 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 WDR47O94967 919 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 SERPINE1P05121 402 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 RPS17P08708 135 aaKnown RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 NCF1P14598 390 aaPredicted RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 EZRP15311 586 aaKnown RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 HNF4AP41235 474 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 GRIA3P42263 894 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 CCR8P51685 355 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 MTTPP55157 894 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 PKNOX1P55347 436 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 PHEXP78562 749 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 FOXL1Q12952 345 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 LCP2Q13094 533 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 E2F2Q14209 437 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 FASTKQ14296 549 aaKnown RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 GRM7Q14831 915 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 HIST2H2ACQ16777 129 aaPredicted RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 CCSMST1Q4G0I0 132 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 PLA1AQ53H76 456 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 ZNF678Q5SXM1 525 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 LIPJQ5W064 366 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 HIST2H2AA3Q6FI13 130 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 COX15Q7KZN9 410 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 ANKRD13BQ86YJ7 626 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 METTL27Q8N6F8 245 aaPredicted RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 AMER2Q8N7J2 671 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 TTC29Q8NA56 475 aaPredicted RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 ABHD11Q8NFV4 315 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 OR2L3Q8NG85 312 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 OR52N2Q8NGI0 321 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 OR2A1Q8NGT9 310 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 FAM76AQ8TAV0 307 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 TBC1D15Q8TC07 691 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 CREB3L4Q8TEY5 395 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 DYDC1Q8WWB3 177 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 SLC5A11Q8WWX8 675 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 TFAP2CQ92754 450 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 EXT2Q93063 718 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 PHF21BQ96EK2 531 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 WDR34Q96EX3 536 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 PTCD3Q96EY7 689 aaKnown RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 CCT7Q99832 543 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 TMEM79Q9BSE2 394 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 NTMT1Q9BV86 223 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 DRC3Q9H069 523 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 MMP27Q9H306 513 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 NT5DC2Q9H857 520 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 MSL2Q9HCI7 577 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 MRPS30Q9NP92 439 aaKnown RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 CUTCQ9NTM9 273 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 INTS9Q9NV88 658 aaKnown RBP6.08□□□□□ -1.44
LDHA-223ENST00000545215 TMEM184CQ9NVA4 438 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 KIF17Q9P2E2 1029 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 SLC17A7Q9P2U7 560 aa6.08□□□□□ -1.44
LDHA-223ENST00000545215 TAC3Q9UHF0 121 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms