RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 ACOT7O00154 380 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 NDUFB5O43674 189 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 UGT2B17O75795 530 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 GLSO94925 669 aaPredicted RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 ANGPTL1O95841 491 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 RFPL3SP0C7P2 107 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 ESRRAP11474 423 aaPredicted RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 RNF144AP50876 292 aaPredicted RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 PPIAP62937 165 aaKnown RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 CBX1P83916 185 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 CDK6Q00534 326 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 ALDH6A1Q02252 535 aaKnown RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 ZNF141Q15928 474 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 ADRM1Q16186 407 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 KLHL26Q53HC5 615 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 RPS26P11Q5JNZ5 115 aaPredicted RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 PDZK1Q5T2W1 519 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 AP1ARQ63HQ0 302 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 TIGD3Q6B0B8 471 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 OR5M10Q6IEU7 315 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 C8orf82Q6P1X6 216 aaPredicted RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 PRICKLE2Q7Z3G6 844 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 ARPINQ7Z6K5 226 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 SERPINA11Q86U17 422 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 SLC22A16Q86VW1 577 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 PTOV1Q86YD1 416 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 WDSUB1Q8N9V3 476 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 OR1J4Q8NGS1 313 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 NFKBIDQ8NI38 313 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 CPT1CQ8TCG5 803 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 DUSP19Q8WTR2 217 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 FAR1Q8WVX9 515 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 ZG16BQ96DA0 208 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 GNRHR2Q96P88 292 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 TREX2Q9BQ50 279 aaPredicted RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 QRSL1Q9H0R6 528 aaKnown RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 TSPAN10Q9H1Z9 355 aaPredicted RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 PIF1Q9H611 641 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 MTHFD2LQ9H903 347 aaPredicted RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 SDHAF3Q9NRP4 125 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 OLAHQ9NV23 265 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 CMTM6Q9NX76 183 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 L3MBTL1Q9Y468 752 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 DTNAQ9Y4J8 743 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 HRH3Q9Y5N1 445 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 PRRC2CQ9Y520 2896 aaKnown RBP12.44□□□□□ -0.42
SP140-213ENST00000543928 A0A0G2JPF8 293 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 CCT8L1PA6NM43 557 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 HNRNPCL2B2RXH8 293 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 HNRNPCL3B7ZW38 293 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 TFECO14948 347 aaPredicted RBP12.43□□□□□ -0.42
SP140-213ENST00000543928 HNRNPCL1O60812 293 aaKnown RBP12.43□□□□□ -0.42
SP140-213ENST00000543928 HNRNPCL4P0DMR1 293 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 ELAVL4P26378 380 aaKnown RBP12.43□□□□□ -0.42
SP140-213ENST00000543928 GZMMP51124 257 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 MNAT1P51948 309 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 SLC7A2P52569 658 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 PSME3P61289 254 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 C17orf67Q0P5P2 114 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 SCARB2Q14108 478 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 CD226Q15762 336 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 MAPK14Q16539 360 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 ZNF630Q2M218 657 aaPredicted RBP12.43□□□□□ -0.42
SP140-213ENST00000543928 HYAL4Q2M3T9 481 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 PRAMEF8Q5VWM4 474 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 PRAMEF7Q5VXH5 474 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 REEP3Q6NUK4 255 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 NET1Q7Z628 596 aaPredicted RBP12.43□□□□□ -0.42
SP140-213ENST00000543928 CALHM3Q86XJ0 350 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 PLCZ1Q86YW0 608 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 SLC15A3Q8IY34 581 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 ZZZ3Q8IYH5 903 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 TMEM251Q8N6I4 163 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 METTL25Q8N6Q8 603 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 C11orf65Q8NCR3 313 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 FBXO27Q8NI29 283 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 PMM1Q92871 262 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 ZNF703Q9H7S9 590 aaPredicted RBP12.43□□□□□ -0.42
SP140-213ENST00000543928 BCL2L10Q9HD36 194 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 AGPAT4Q9NRZ5 378 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 B4GALT7Q9UBV7 327 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 C15orf41Q9Y2V0 281 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 SVILO95425 2214 aa12.43□□□□□ -0.42
SP140-213ENST00000543928 DSPPQ9NZW4 1301 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 SERINC4A6NH21 518 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 AGAP5A6NIR3 686 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 B4DXG7 233 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 NPIPA5E9PKD4 350 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 H3BNH8 94 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 NME4O00746 187 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 PGM3O95394 542 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 T-ENOLP0DO92 83 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 CALB2P22676 271 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 MST1P26927 711 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 MAGEA5P43359 124 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 MXRA7P84157 204 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 SLC25A3Q00325 362 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 RBBP4Q09028 425 aa12.42□□□□□ -0.42
SP140-213ENST00000543928 ZNF324BQ6AW86 544 aaPredicted RBP12.42□□□□□ -0.42
SP140-213ENST00000543928 MISPQ8IVT2 679 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms