RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 METAP1P53582 386 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 EFR3AQ14156 821 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 GXYLT1Q4G148 440 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 TEX19Q8NA77 164 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 EPYCQ99645 322 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 ZNF700Q9H0M5 742 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 TM7SF3Q9NS93 570 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 WSB2Q9NYS7 404 aaPredicted RBP12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 UBQLN2Q9UHD9 624 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 ALG5Q9Y673 324 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 TIMP2P16035 220 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 MAOBP27338 520 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 YBX1P67809 324 aaKnown RBP12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 ZNF776Q68DI1 518 aaPredicted RBP12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 PTRH1Q86Y79 214 aaKnown RBP12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 LYSMD2Q8IV50 215 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 OR2L2Q8NH16 312 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 CXorf36Q9H7Y0 433 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 SLC6A13Q9NSD5 602 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 DNMT3BQ9UBC3 853 aaKnown RBP12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 PSORS1C1Q9UIG5 152 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 IER3IP1Q9Y5U9 82 aa12.17□□□□□ -0.46
TUBGCP2-210ENST00000543663 UBXN7O94888 489 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 PRKCAP17252 672 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 RPS19P39019 145 aaKnown RBP12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 SLC19A1P41440 591 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 MRPL58Q14197 206 aaKnown RBP12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 ERV3-1Q14264 604 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 DECR1Q16698 335 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 SHISA6Q6ZSJ9 500 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 GID4Q8IVV7 300 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 GDPD1Q8N9F7 314 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 CDS1Q92903 461 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 PIGUQ9H490 435 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 GALNT9Q9HCQ5 603 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 TEX13DA0A0J9YY54 714 aaPredicted RBP12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 RNASET2O00584 256 aaKnown RBP12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 ARPC1BO15143 372 aaKnown RBP12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 AGR2O95994 175 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 NR0B1P51843 470 aaKnown RBP12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 CXCR4P61073 352 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 GPR19Q15760 415 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 NKG7Q16617 165 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 ACSM3Q53FZ2 586 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 CARD17Q5XLA6 110 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 ZNF227Q86WZ6 799 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 PLA2G15Q8NCC3 412 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 OR2AJ1Q8NGZ0 328 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 THAP4Q8WY91 577 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 RIT1Q92963 219 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 SLC25A44Q96H78 314 aaPredicted RBP12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 VN1R3Q9BXE9 311 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 MROQ9BYG7 248 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 SAV1Q9H4B6 383 aaPredicted RBP12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 ACSL5Q9ULC5 683 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 SNX11Q9Y5W9 270 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 LAMA3Q16787 3333 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 GXYLT2A0PJZ3 443 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 AGPAT2O15120 278 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 GABARAPO95166 117 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 PROS1P07225 676 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 C1SP09871 688 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 HSD11B1P28845 292 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 PXNP49023 591 aaPredicted RBP12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 CDNFQ49AH0 187 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 SPAG16Q8N0X2 631 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 TESCQ96BS2 214 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 EID2BQ96D98 161 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 C4orf36Q96KX1 117 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 TRIB3Q96RU7 358 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 LIPT1Q9Y234 373 aa12.16□□□□□ -0.46
TUBGCP2-210ENST00000543663 SLC22A31A6NKX4 558 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 CYB5AP00167 134 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 SNRPBP14678 240 aaKnown RBP12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 DDCP20711 480 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 MLLT3P42568 568 aaPredicted RBP12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 GARNL3Q5VVW2 1013 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 OR5M10Q6IEU7 315 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 LEG1Q6P5S2 330 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 OR2L8Q8NGY9 312 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 ZC3H10Q96K80 434 aaKnown RBP12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 HYLS1Q96M11 299 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 CWH43Q9H720 699 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 HEBP2Q9Y5Z4 205 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 RGS9O75916 674 aaPredicted RBP12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 ITGAMP11215 1152 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 AKR1C4P17516 323 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 GRK5P34947 590 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 SLC35A2P78381 396 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 TAP2Q03519 686 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 GRSF1Q12849 480 aaKnown RBP eCLIP12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 LTB4RQ15722 352 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 SLC46A3Q7Z3Q1 461 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 OR5T3Q8NGG3 340 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 OR2A12Q8NGT7 310 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 OR2M4Q96R27 311 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 RAD9AQ99638 391 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 C11orf54Q9H0W9 315 aaPredicted RBP12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 PLXNA1Q9UIW2 1896 aa12.15□□□□□ -0.46
TUBGCP2-210ENST00000543663 CDC14CA4D256 554 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms