RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 VPS29Q9UBQ0 182 aa16.22■□□□□ 0.19
RAP1B-229ENST00000543393 MCM8Q9UJA3 840 aa16.22■□□□□ 0.19
RAP1B-229ENST00000543393 MRTO4Q9UKD2 239 aaKnown RBP16.22■□□□□ 0.19
RAP1B-229ENST00000543393 SNX6Q9UNH7 406 aa16.22■□□□□ 0.19
RAP1B-229ENST00000543393 HMX2A2RU54 273 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 STX16-NPEPL1H3BU86 382 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 PPP6CO00743 305 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 STX16O14662 325 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 UTS2O95399 124 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 PYGBP11216 843 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 IGFBP5P24593 272 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 PSMA4P25789 261 aaKnown RBP16.21■□□□□ 0.19
RAP1B-229ENST00000543393 MRPS25P82663 173 aaKnown RBP16.21■□□□□ 0.19
RAP1B-229ENST00000543393 CSTF3Q12996 717 aaKnown RBP16.21■□□□□ 0.19
RAP1B-229ENST00000543393 IL17RELQ6ZVW7 336 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 CCDC25Q86WR0 208 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 CREG2Q8IUH2 290 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 TUSC5Q8IXB3 177 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 PLD6Q8N2A8 252 aaKnown RBP16.21■□□□□ 0.19
RAP1B-229ENST00000543393 GTPBP8Q8N3Z3 284 aaPredicted RBP16.21■□□□□ 0.19
RAP1B-229ENST00000543393 ZNF525Q8N782 197 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 RNF128Q8TEB7 428 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 OSTF1Q92882 214 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 RNF145Q96MT1 663 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 USB1Q9BQ65 265 aaKnown RBP16.21■□□□□ 0.19
RAP1B-229ENST00000543393 DPH5Q9H2P9 285 aa16.21■□□□□ 0.19
RAP1B-229ENST00000543393 A0A087WV62 115 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 A0A087WZY1 265 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 GNG14A0A1W2PPG7 69 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 NDUFB5O43674 189 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 STX2P32856 288 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 PSMD4P55036 377 aaKnown RBP16.2■□□□□ 0.18
RAP1B-229ENST00000543393 RAE1P78406 368 aaKnown RBP16.2■□□□□ 0.18
RAP1B-229ENST00000543393 CALCOCO2Q13137 446 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 ITGADQ13349 1161 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 GRAMD1BQ3KR37 738 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 PDSS1Q5T2R2 415 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 FAM168AQ92567 244 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 ZBTB8AQ96BR9 441 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 BBS4Q96RK4 519 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 KLHL13Q9P2N7 655 aa16.2■□□□□ 0.18
RAP1B-229ENST00000543393 PLCE1Q9P212 2302 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 C7orf72A4D263 438 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 CCDC188H7C350 402 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 ABCD4O14678 606 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 PCDH7O60245 1069 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 OTCP00480 354 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 PABPC4LP0CB38 370 aaKnown RBP16.19■□□□□ 0.18
RAP1B-229ENST00000543393 TSPAN8P19075 237 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 ME2P23368 584 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 CARD18P57730 90 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 NAB1Q13506 487 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 HEPACAMQ14CZ8 416 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 P2RY6Q15077 328 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 ZNF239Q16600 458 aaKnown RBP16.19■□□□□ 0.18
RAP1B-229ENST00000543393 PLPPR5Q32ZL2 321 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 CPTPQ5TA50 214 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 C11orf71Q6IPW1 123 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 TMEM107Q6UX40 140 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 BHLHA15Q7RTS1 189 aaPredicted RBP16.19■□□□□ 0.18
RAP1B-229ENST00000543393 MRRFQ96E11 262 aaKnown RBP16.19■□□□□ 0.18
RAP1B-229ENST00000543393 REXO5Q96IC2 774 aaKnown RBP16.19■□□□□ 0.18
RAP1B-229ENST00000543393 CHODLQ9H9P2 273 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 CBLN4Q9NTU7 201 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 RNF14Q9UBS8 474 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 DMGDHQ9UI17 866 aaKnown RBP16.19■□□□□ 0.18
RAP1B-229ENST00000543393 TMCO1Q9UM00 188 aa16.19■□□□□ 0.18
RAP1B-229ENST00000543393 C19orf53Q9UNZ5 99 aaPredicted RBP16.19■□□□□ 0.18
RAP1B-229ENST00000543393 A0A1W2PRB8 838 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 MYO1GB0I1T2 1018 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 ZNF814B7Z6K7 855 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 UPK1AO00322 258 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 IGKV1D-16P01601 117 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 JUNP05412 331 aaKnown RBP16.18■□□□□ 0.18
RAP1B-229ENST00000543393 CHN1P15882 459 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 TYK2P29597 1187 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 TTKP33981 857 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 CDH13P55290 713 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 PPA1Q15181 289 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 RAB35Q15286 201 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 RNPS1Q15287 305 aaKnown RBP16.18■□□□□ 0.18
RAP1B-229ENST00000543393 STK11Q15831 433 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 TCHHL1Q5QJ38 904 aaPredicted RBP16.18■□□□□ 0.18
RAP1B-229ENST00000543393 LILRA2Q8N149 483 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 C10orf105Q8TEF2 133 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 C16orf78Q8WTQ4 265 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 KLHL15Q96M94 604 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 LMF2Q9BU23 707 aaKnown RBP16.18■□□□□ 0.18
RAP1B-229ENST00000543393 VPS11Q9H270 941 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 MED17Q9NVC6 651 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 ZNF225Q9UK10 706 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 KCNS2Q9ULS6 477 aa16.18■□□□□ 0.18
RAP1B-229ENST00000543393 GXYLT2A0PJZ3 443 aa16.17■□□□□ 0.18
RAP1B-229ENST00000543393 SLC35F4A4IF30 521 aa16.17■□□□□ 0.18
RAP1B-229ENST00000543393 LYZL6O75951 148 aa16.17■□□□□ 0.18
RAP1B-229ENST00000543393 OR4F21O95013 312 aa16.17■□□□□ 0.18
RAP1B-229ENST00000543393 PSMG1O95456 288 aa16.17■□□□□ 0.18
RAP1B-229ENST00000543393 RPS17P08708 135 aaKnown RBP16.17■□□□□ 0.18
RAP1B-229ENST00000543393 RBP1P09455 135 aa16.17■□□□□ 0.18
RAP1B-229ENST00000543393 HSD3B1P14060 373 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms