RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 FAPQ12884 760 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 RASA2Q15283 850 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 TAB1Q15750 504 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 UNC50Q53HI1 259 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 FIGNL1Q6PIW4 674 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 DNAJC14Q6Y2X3 702 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 KBTBD8Q8NFY9 601 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 OR2V1Q8NHB1 315 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 KLHDC3Q9BQ90 382 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 RAB17Q9H0T7 212 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 GLIPR2Q9H4G4 154 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 ZDHHC18Q9NUE0 388 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 FBXO34Q9NWN3 711 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 NINJ2Q9NZG7 142 aa15.86■□□□□ 0.13
CLSTN3-214ENST00000542663 MALRD1Q5VYJ5 2156 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 A0A096LNT2 108 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 A0A1W2PP18 115 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 ESYT3A0FGR9 886 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 ULK1O75385 1050 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 SLITRK5O94991 958 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 SYNGR4O95473 234 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 ANXA4P09525 319 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 PSMD4P55036 377 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 RAC1P63000 192 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 SFRP5Q5T4F7 317 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 TFAP2EQ6VUC0 442 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 ESPNLQ6ZVH7 1005 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 ZNF619Q8N2I2 560 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 PIK3R3Q92569 461 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 ELP4Q96EB1 424 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 RNF145Q96MT1 663 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 ZNF382Q96SR6 550 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 TRAF4Q9BUZ4 470 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 HDHD5Q9BXW7 423 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 TRIM2Q9C040 744 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 ESRP2Q9H6T0 727 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 TMEM185BQ9H7F4 350 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 LRTM1Q9HBL6 345 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 DDX18Q9NVP1 670 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 SIRT5Q9NXA8 310 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 TAS2R7Q9NYW3 318 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 MRTO4Q9UKD2 239 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 PLCE1Q9P212 2302 aa15.85■□□□□ 0.13
CLSTN3-214ENST00000542663 A0A087WZY1 265 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 C7orf72A4D263 438 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 SUPT7LO94864 414 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 FAM157CP0CG43 387 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 ADH6P28332 368 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 GABRA3P34903 492 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 GSTM5P46439 218 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 BTKQ06187 659 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 BSPH1Q075Z2 132 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 ZNF763Q0D2J5 394 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 C2orf80Q0P641 193 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 ZNHIT3Q15649 155 aaPredicted RBP15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 PLPPR5Q32ZL2 321 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 ZNF678Q5SXM1 525 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 HBMQ6B0K9 141 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 FAM71E1Q6IPT2 247 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 GPRIN3Q6ZVF9 776 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 NUFIP2Q7Z417 695 aaKnown RBP15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 EXOC3L1Q86VI1 746 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 OR4C3Q8NH37 302 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 POC1BQ8TC44 478 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 METTL6Q8TCB7 284 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 RNF128Q8TEB7 428 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 ABHD3Q8WU67 409 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 ROBO4Q8WZ75 1007 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 AMDHD1Q96NU7 426 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 TMEM237Q96Q45 408 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 KCNA7Q96RP8 456 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 FUT8Q9BYC5 575 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 GRID1Q9ULK0 1009 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 ANK2Q01484 3957 aa15.84■□□□□ 0.13
CLSTN3-214ENST00000542663 A0A1W2PRB8 838 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 DPRXA6NFQ7 191 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 ALG1L2C9J202 215 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 OXSR1O95747 527 aaPredicted RBP15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 C8BP07358 591 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 INHBAP08476 426 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 SHC1P29353 583 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 HMOX2P30519 316 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 PHBP35232 272 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 MAP3K8P41279 467 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 SLC18A2Q05940 514 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 ZNF239Q16600 458 aaKnown RBP15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 C6orf52Q5T4I8 152 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 CPTPQ5TA50 214 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 CEP112Q8N8E3 955 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 GATSQ8NAP1 163 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 CDC26Q8NHZ8 85 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 PIWIL2Q8TC59 973 aaKnown RBP15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 HSD17B8Q92506 261 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 HOXB13Q92826 284 aaPredicted RBP15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 OSTF1Q92882 214 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 ZBTB8AQ96BR9 441 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 PAFAH2Q99487 392 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 MED17Q9NVC6 651 aa15.83■□□□□ 0.12
CLSTN3-214ENST00000542663 NFU1Q9UMS0 254 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms