RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 ADAM21Q9UKJ8 722 aa7.94□□□□□ -1.14
CLSTN3-212ENST00000541770 SNX8Q9Y5X2 465 aa7.94□□□□□ -1.14
CLSTN3-212ENST00000541770 NPFFR2Q9Y5X5 522 aa7.94□□□□□ -1.14
CLSTN3-212ENST00000541770 A0A1W2PP18 115 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 HSPB2A8KAH6 182 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 SYT5O00445 386 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 RFXANKO14593 260 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 CCDC22O60826 627 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 NKX2-2O95096 273 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 CPSF4O95639 269 aaKnown RBP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 IGHG3P01860 377 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 P04436 131 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 HMGN2P05204 90 aaKnown RBP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 ABCB1P08183 1280 aaPredicted RBP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 KRT16P08779 473 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 GABRA1P14867 456 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 ABCD3P28288 659 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 SOAT1P35610 550 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 MAGEA8P43361 318 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 TRPC1P48995 793 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 PRKAG1P54619 331 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 CORO7P57737 925 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 TXNL4AP83876 142 aaKnown RBP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 CBX1P83916 185 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 PPP2R2BQ00005 443 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 SF3A3Q12874 501 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 LASP1Q14847 261 aaKnown RBP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 HSPB2Q16082 182 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 SPDYE7PQ495Y7 208 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 CYP27C1Q4G0S4 372 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 TIGD2Q4W5G0 525 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 SAXO2Q658L1 398 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 CDC73Q6P1J9 531 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 TMEM81Q6P7N7 255 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 NPSR1Q6W5P4 371 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 RTL4Q6ZR62 310 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 CXXC5Q7LFL8 322 aaKnown RBP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 PIGWQ7Z7B1 504 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 P3H2Q8IVL5 708 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC44A2Q8IWA5 706 aaPredicted RBP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 LINC01560Q8TB33 94 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 MIPOL1Q8TD10 442 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 GTF2H4Q92759 462 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 RNASE6Q93091 150 aaKnown RBP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 VPS33AQ96AX1 596 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 NEURL3Q96EH8 262 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 SECISBP2Q96T21 854 aaKnown RBP7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 STACQ99469 402 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 ACTRT3Q9BYD9 372 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 NMUR2Q9GZQ4 415 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 FAM107BQ9H098 131 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 PIGUQ9H490 435 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 Q9N2J8 555 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 SH2D2AQ9NP31 389 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 EQTNQ9NQ60 294 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 DUSP22Q9NRW4 184 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 SACM1LQ9NTJ5 587 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 ACANP16112 2415 aa7.93□□□□□ -1.14
CLSTN3-212ENST00000541770 AKAP6Q13023 2319 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 A0A096LPI6 279 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 RNF103-CHMP3A0A140T963 221 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 A0A1B0GVC2 190 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 OR6C70A6NIJ9 312 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 DUXAA6NLW8 204 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 H7C1Q1 480 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 NR5A2O00482 541 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 TP53I11O14683 189 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 ARHGEF9O43307 516 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 SUSD5O60279 629 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 TSPAN2O60636 221 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 NME6O75414 186 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 PPM1BO75688 479 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 GLSO94925 669 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 FAM107AO95990 144 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 ALOX5P09917 674 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 ACP2P11117 423 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 EPXP11678 715 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 PTPN6P29350 595 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 LCN1P31025 176 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 PIGAP37287 484 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 CDKN2CP42773 168 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 AGFG1P52594 562 aaKnown RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 PNLIPRP2P54317 469 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 PSMD4P55036 377 aaKnown RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 MRPS22P82650 360 aaKnown RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 PLCXD2Q0VAA5 305 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 KLF10Q13118 480 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 GAB1Q13480 694 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 TP53BP2Q13625 1128 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 DAZAP2Q15038 168 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 MAPRE2Q15555 327 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 NNATQ16517 81 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 DECR1Q16698 335 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 LRIF1Q5T3J3 769 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 SHEQ5VZ18 495 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 ZNF621Q6ZSS3 439 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 NUP54Q7Z3B4 507 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 SZRD1Q7Z422 152 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 C6orf120Q7Z4R8 191 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC16A11Q8NCK7 471 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms