RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 GOLGA6L19H0YKK7 550 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 H7C417 338 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 NDUFS8O00217 210 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 RTCAO00442 366 aaKnown RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CLGNO14967 610 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 SS18L1O75177 396 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 UGT2B11O75310 529 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 WDR47O94967 919 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 VENTXO95231 258 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 PLGP00747 810 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 TGFAP01135 160 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 MLNP12872 115 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CREB1P16220 341 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 GPX3P22352 226 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CNTFP26441 200 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 SERPINB1P30740 379 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 SRP14P37108 136 aaKnown RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CASP2P42575 452 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 SSR2P43308 183 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 MAGEA6P43360 314 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 NEK2P51955 445 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 EFNA4P52798 201 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 SUCLG1P53597 346 aaKnown RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 NAP1L1P55209 391 aaKnown RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CTBP2P56545 445 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 DSCR4P56555 118 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 RPS3AP61247 264 aaKnown RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 ACTG1P63261 375 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 TNFRSF17Q02223 184 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 PLCXD2Q0VAA5 305 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 SLAMF1Q13291 335 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 PON3Q15166 354 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 HIST2H2ACQ16777 129 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CTU2Q2VPK5 515 aaKnown RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 HSP90AA5PQ58FG0 334 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 PAGE2BQ5JRK9 111 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 C18orf63Q68DL7 685 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 HIST2H2BDQ6DRA6 164 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 HIST2H2AA3Q6FI13 130 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 OR4C11Q6IEV9 310 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 C11orf71Q6IPW1 123 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 ADNP2Q6IQ32 1131 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 DRICH1Q6PGQ1 229 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 PEX26Q7Z412 305 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 GPR180Q86V85 440 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CNGA4Q8IV77 575 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CCDC170Q8IYT3 715 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 ZCCHC7Q8N3Z6 543 aaKnown RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 NINQ8N4C6 2090 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 METTL25Q8N6Q8 603 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 LRRC17Q8N6Y2 441 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF525Q8N782 197 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 BANPQ8N9N5 519 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 SEMA6DQ8NFY4 1073 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 KBTBD8Q8NFY9 601 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 C1orf54Q8WWF1 131 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 KAT2AQ92830 837 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 GCDHQ92947 438 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 TMCO6Q96DC7 493 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 OMA1Q96E52 524 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 WDR34Q96EX3 536 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 PTCD3Q96EY7 689 aaKnown RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 RADILQ96JH8 1075 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 LRRC37BQ96QE4 947 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 EGFL8Q99944 293 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 FAM167BQ9BTA0 163 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 EFCAB11Q9BUY7 163 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 MS4A8Q9BY19 250 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 STMN4Q9H169 189 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 NXF5Q9H1B4 397 aaKnown RBP4.08□□□□□ -1.76
SNHG1-214ENST00000540865 GLRX2Q9NS18 164 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CBLN4Q9NTU7 201 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 ARMCX1Q9P291 453 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 PRSS50Q9UI38 385 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 CFL2Q9Y281 166 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 EPPK1P58107 5090 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GOLGA8QA0A0J9YX86 632 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GOLGA8OA6NCC3 632 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 DPRXA6NFQ7 191 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 OR6C70A6NIJ9 312 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 VWC2LB2RUY7 222 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 SHISA9B4DS77 424 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GOLGA8NF8WBI6 632 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 H0YC42 278 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GOLGA8RI6L899 631 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 TO15178 435 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 SEC14L5O43304 696 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 PRAMEF4O60810 478 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 RAMP1O60894 148 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GCM2O75603 506 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 AQP8O94778 261 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 AHSGP02765 367 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CCDC175P0C221 793 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CT62P0C5K7 136 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CCDC166P0CW27 439 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 NR2F6P10588 404 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 APEHP13798 732 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CD22P20273 847 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 S1PR1P21453 382 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 DRD5P21918 477 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms