RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ZNF672Q499Z4 452 aaPredicted RBP6.51□□□□□ -1.37
YBX3-209ENST00000540747 TCHHL1Q5QJ38 904 aaPredicted RBP6.51□□□□□ -1.37
YBX3-209ENST00000540747 TTC19Q6DKK2 380 aaPredicted RBP6.51□□□□□ -1.37
YBX3-209ENST00000540747 MFSD12Q6NUT3 480 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 KLC3Q6P597 504 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 TFAP2EQ6VUC0 442 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 BEND4Q6ZU67 534 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 GALNT10Q86SR1 603 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 ATG4DQ86TL0 474 aaPredicted RBP6.51□□□□□ -1.37
YBX3-209ENST00000540747 MARCH3Q86UD3 253 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 WFDC8Q8IUA0 241 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 FAM9CQ8IZT9 166 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 OR10D3Q8NH80 312 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 BCAS4Q8TDM0 211 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 C16orf78Q8WTQ4 265 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 DUSP19Q8WTR2 217 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 SELENOMQ8WWX9 145 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 NEUROG1Q92886 237 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 ATP6V1E2Q96A05 226 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 EXOSC8Q96B26 276 aaKnown RBP6.51□□□□□ -1.37
YBX3-209ENST00000540747 S100PBPQ96BU1 408 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 KLHDC3Q9BQ90 382 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 LMF2Q9BU23 707 aaKnown RBP6.51□□□□□ -1.37
YBX3-209ENST00000540747 TRAF4Q9BUZ4 470 aaPredicted RBP6.51□□□□□ -1.37
YBX3-209ENST00000540747 ACPTQ9BZG2 426 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 TRIM2Q9C040 744 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 RASSF4Q9H2L5 321 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 PTGES2Q9H7Z7 377 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 GLRX2Q9NS18 164 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 TAS2R9Q9NYW1 312 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 TAS2R7Q9NYW3 318 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 SNX6Q9UNH7 406 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 RNF115Q9Y4L5 304 aa6.51□□□□□ -1.37
YBX3-209ENST00000540747 A0A087WUV0 522 aaPredicted RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 A0A087WZY1 265 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 A0A0J9YW62 118 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 A8MT66 165 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 A8MV72 311 aaPredicted RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 ALG1L2C9J202 215 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 UPK1AO00322 258 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 NDUFAB1O14561 156 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 EIF1AYO14602 144 aaKnown RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 CXCL13O43927 109 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 PCDH7O60245 1069 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 ADAM11O75078 769 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 COQ9O75208 318 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 SLITRK5O94991 958 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 OR4F21O95013 312 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 UTS2O95399 124 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 ANGPTL1O95841 491 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 C8BP07358 591 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 TSPAN8P19075 237 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 ADH6P28332 368 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 TYK2P29597 1187 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 TIA1P31483 386 aaKnown RBP eCLIP6.5□□□□□ -1.37
YBX3-209ENST00000540747 THBS2P35442 1172 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 CDKN1AP38936 164 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 MDH1P40925 334 aaKnown RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 EIF1AXP47813 144 aaKnown RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 CCT5P48643 541 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 HTR6P50406 440 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 PLTPP55058 493 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 CDH13P55290 713 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 CAV1Q03135 178 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 ZNF155Q12901 538 aaPredicted RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 TAB1Q15750 504 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 PLPPR5Q32ZL2 321 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 GRAMD1BQ3KR37 738 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 CHRFAM7AQ494W8 412 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 EXOSC6Q5RKV6 272 aaKnown RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 C6orf52Q5T4I8 152 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 LGSNQ5TDP6 509 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 EXOC3L1Q86VI1 746 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 C10orf67Q8IYJ2 551 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 STEAP2Q8NFT2 490 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 OR10H5Q8NGA6 315 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 OR2V1Q8NHB1 315 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 POC1BQ8TC44 478 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 PIWIL2Q8TC59 973 aaKnown RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 RNF128Q8TEB7 428 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 SMAP2Q8WU79 429 aaPredicted RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 FBXW5Q969U6 566 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 ZBED6CLQ96FA7 236 aaPredicted RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 TRMT61AQ96FX7 289 aaKnown RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 APIPQ96GX9 242 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 ZNF382Q96SR6 550 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 MRPL57Q9BQC6 102 aaKnown RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 VPS11Q9H270 941 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 ACSS3Q9H6R3 686 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 YAE1D1Q9NRH1 226 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 SDHAF3Q9NRP4 125 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 ZDHHC18Q9NUE0 388 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 NMRK1Q9NWW6 199 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 TMEM160Q9NX00 188 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 PAQR5Q9NXK6 330 aaPredicted RBP6.5□□□□□ -1.37
YBX3-209ENST00000540747 LIPT1Q9Y234 373 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 OR10H1Q9Y4A9 318 aa6.5□□□□□ -1.37
YBX3-209ENST00000540747 IGHV4-30-2A0A087WSY4 118 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 A0A1W2PRB8 838 aa6.49□□□□□ -1.37
YBX3-209ENST00000540747 GXYLT2A0PJZ3 443 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms