RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MTNR1BP49286 362 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 SLC16A1P53985 500 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 LY6G5CQ5SRR4 150 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 C6orf132Q5T0Z8 1188 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 CXXC5Q7LFL8 322 aaKnown RBP13□□□□□ -0.33
SCNN1A-215ENST00000540037 KANSL1Q7Z3B3 1105 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 CEACAM19Q7Z692 300 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 TOMM5Q8N4H5 51 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 OR10H4Q8NGA5 316 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 THAP4Q8WY91 577 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 YIPF5Q969M3 257 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 TCEAL4Q96EI5 215 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 BBS4Q96RK4 519 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 RBCK1Q9BYM8 510 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 SLC38A1Q9H2H9 487 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 C6orf106Q9H6K1 298 aaPredicted RBP13□□□□□ -0.33
SCNN1A-215ENST00000540037 SLC35C2Q9NQQ7 365 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 H2AFY2Q9P0M6 372 aaPredicted RBP13□□□□□ -0.33
SCNN1A-215ENST00000540037 IRAK3Q9Y616 596 aa13□□□□□ -0.33
SCNN1A-215ENST00000540037 TEX51A0A1B0GUA7 166 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 G3V3Q6 166 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 HOXA2O43364 376 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 FGBP02675 491 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 WNT1P04628 370 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 ZGLP1P0C6A0 271 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 CLUP10909 449 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 NPR2P20594 1047 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 GPR1P46091 355 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 ACSM1Q08AH1 577 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 TRAM2Q15035 370 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 GSG1Q2KHT4 349 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 LCTLQ6UWM7 567 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 SLC51BQ86UW2 128 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 ZNF527Q8NB42 609 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 OR8K5Q8NH50 307 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 OR5W2Q8NH69 310 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 SUN3Q8TAQ9 357 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 PIGXQ8TBF5 258 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 CNRIP1Q96F85 164 aaPredicted RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 DLL4Q9NR61 685 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 SAGE1Q9NXZ1 904 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 IL20Q9NYY1 176 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 TEX46H3BTG2 121 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 J3QRE1 110 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 SSNA1O43805 119 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 CFL1P23528 166 aaKnown RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 RBMS1P29558 406 aaKnown RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 SSR2P43308 183 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 PUDPQ08623 228 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 MESP2Q0VG99 397 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 AGERQ15109 404 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 GRK1Q15835 563 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 ZNF620Q6ZNG0 422 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 LUZP2Q86TE4 346 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 LINC00471Q8N535 108 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 ACOT12Q8WYK0 555 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 DTD2Q96FN9 168 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 CHIAQ9BZP6 476 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 OR52A5Q9H2C5 316 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 RHBGQ9H310 441 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 CCDC86Q9H6F5 360 aaKnown RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 AUNIPQ9H7T9 357 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 FBXL4Q9UKA2 621 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 CACNB4O00305 520 aaPredicted RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 TGM5O43548 720 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 PEPDP12955 493 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 KHKP50053 298 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 ZNF697Q5TEC3 545 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 CD276Q5ZPR3 534 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 C18orf63Q68DL7 685 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 ACBD7Q8N6N7 88 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 OR2T35Q8NGX2 323 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 DOK4Q8TEW6 326 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 SETD7Q8WTS6 366 aaKnown RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 HMGB4Q8WW32 186 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 TFGQ92734 400 aaPredicted RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 WDR89Q96FK6 387 aaPredicted RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 AIF1LQ9BQI0 150 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 GSDMCQ9BYG8 508 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 ZCCHC2Q9C0B9 1178 aaKnown RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 UBQLN3Q9H347 655 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 METTL17Q9H7H0 456 aaPredicted RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 ACSS1Q9NUB1 689 aaPredicted RBP12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 OR6C2Q9NZP2 312 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 PHF11Q9UIL8 331 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 SCN3AQ9NY46 2000 aa12.99□□□□□ -0.33
SCNN1A-215ENST00000540037 CHD7Q9P2D1 2997 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 CENPVL1A0A0U1RR11 272 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 TRIM77I1YAP6 450 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 TAS2R38P59533 333 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 COL28A1Q2UY09 1125 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 SFRP4Q6FHJ7 346 aaPredicted RBP12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 BHLHB9Q6PI77 547 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 KIAA1324Q6UXG2 1013 aaKnown RBP12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 PLEKHM3Q6ZWE6 761 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 GDF7Q7Z4P5 450 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 MS4A15Q8N5U1 240 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 OR51Q1Q8NH59 317 aa12.98□□□□□ -0.33
SCNN1A-215ENST00000540037 OSTF1Q92882 214 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms