RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 TFAP2EQ6VUC0 442 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 ZNF572Q7Z3I7 529 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 FAM9CQ8IZT9 166 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 GTPBP8Q8N3Z3 284 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 ARIH2OSQ8N7S6 290 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 OSTF1Q92882 214 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 KISS1RQ969F8 398 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 NSUN5Q96P11 429 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 TBL1XR1Q9BZK7 514 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 SLC35C2Q9NQQ7 365 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 GIMAP4Q9NUV9 329 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 VPS29Q9UBQ0 182 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 MCM8Q9UJA3 840 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 SNX6Q9UNH7 406 aa10.33□□□□□ -0.76
CLSTN3-209ENST00000539982 A0A087WV62 115 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 A0A096LPK6 155 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 STX16-NPEPL1H3BU86 382 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 UBFD1O14562 309 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 STX16O14662 325 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 UTS2O95399 124 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 IL3P08700 152 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 IGHV4-31P0DP07 118 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 PTNP21246 168 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 PSMA4P25789 261 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 CARD18P57730 90 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 IRX1P78414 480 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 CALCOCO2Q13137 446 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 ITGADQ13349 1161 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 NAB1Q13506 487 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 HEPACAMQ14CZ8 416 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 RAB35Q15286 201 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 CPTPQ5TA50 214 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 MROH9Q5TGP6 573 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 LIPNQ5VXI9 398 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 APOOLQ6UXV4 268 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 NUFIP2Q7Z417 695 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 CCDC25Q86WR0 208 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 TUSC5Q8IXB3 177 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 FBF1Q8TES7 1133 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 ZBTB8AQ96BR9 441 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 REXO5Q96IC2 774 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 NPAS1Q99742 590 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 CACNG6Q9BXT2 260 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 POTEKPQ9BYX7 375 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 HHATLQ9HCP6 504 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 Q9N2J8 555 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 TMCO1Q9UM00 188 aa10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 C19orf53Q9UNZ5 99 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-209ENST00000539982 HMX2A2RU54 273 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 C7orf72A4D263 438 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 CCDC188H7C350 402 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 NDUFB5O43674 189 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 SLITRK5O94991 958 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 OTCP00480 354 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 RBP1P09455 135 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 ME2P23368 584 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 STX2P32856 288 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 TTKP33981 857 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 RFX3P48380 749 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 RNPS1Q15287 305 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 TECRLQ5HYJ1 363 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 LETMD1Q6P1Q0 360 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 BHLHA15Q7RTS1 189 aaPredicted RBP10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 BANPQ8N9N5 519 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 ACTRT2Q8TDY3 377 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 RNF128Q8TEB7 428 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 ABHD3Q8WU67 409 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 FAM168AQ92567 244 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 PROX1Q92786 737 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 RADILQ96JH8 1075 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 BBS4Q96RK4 519 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 SHCBP1LQ9BZQ2 653 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 GP6Q9HCN6 339 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 TIGARQ9NQ88 270 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 KLHL13Q9P2N7 655 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 DMGDHQ9UI17 866 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 SVEP1Q4LDE5 3571 aa10.31□□□□□ -0.76
CLSTN3-209ENST00000539982 GNG14A0A1W2PPG7 69 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 A0A1W2PRB8 838 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 MYO1GB0I1T2 1018 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 ZNF814B7Z6K7 855 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 UPK1AO00322 258 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 PPP6CO00743 305 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 ABCD4O14678 606 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 PCDH7O60245 1069 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 PRKD3O94806 890 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 PSMG1O95456 288 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 PGRP06401 933 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 YES1P07947 543 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 HSD3B1P14060 373 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 ZNF16P17020 682 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 USF1P22415 310 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 IGFBP5P24593 272 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 HSD3B2P26439 372 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 TYK2P29597 1187 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 GZMKP49863 264 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 CDH11P55287 796 aa10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 RAE1P78406 368 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 LSM11P83369 360 aaKnown RBP eCLIP10.3□□□□□ -0.76
CLSTN3-209ENST00000539982 PPA1Q15181 289 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms