RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ALPK1Q96QP1 1244 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 G6PC3Q9BUM1 346 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 MROQ9BYG7 248 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 ARMC7Q9H6L4 198 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 KRT84Q9NSB2 600 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 SEMA4GQ9NTN9 838 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 A4GNTQ9UNA3 340 aa15.64■□□□□ 0.09
COPS3-212ENST00000539941 SEMA7AO75326 666 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 UGT2B17O75795 530 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 CCNB2O95067 398 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 IGKV3-11P04433 115 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 GNAO1P09471 354 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 ZGLP1P0C6A0 271 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 NID1P14543 1247 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 SLC37A1P57057 533 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 EEF1A1P68104 462 aaKnown RBP15.63■□□□□ 0.09
COPS3-212ENST00000539941 ILKQ13418 452 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 CAMK2BQ13554 666 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 ZSWIM7Q19AV6 140 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 OVCH1Q7RTY7 1134 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 RBM45Q8IUH3 476 aaKnown RBP15.63■□□□□ 0.09
COPS3-212ENST00000539941 NAXDQ8IW45 347 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 IQCF2Q8IXL9 164 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 OR52J3Q8NH60 311 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 OIT3Q8WWZ8 545 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 TMIGD2Q96BF3 282 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 SLC26A1Q9H2B4 701 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 TMEM9BQ9NQ34 198 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 RXFP3Q9NSD7 469 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 QPCTLQ9NXS2 382 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 AKAP7Q9P0M2 348 aaPredicted RBP15.63■□□□□ 0.09
COPS3-212ENST00000539941 TMCC3Q9ULS5 477 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 GPR55Q9Y2T6 319 aaPredicted RBP15.63■□□□□ 0.09
COPS3-212ENST00000539941 CHST2Q9Y4C5 530 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 A0A1W2PRQ8 180 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 B4E171 279 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 UGT2B11O75310 529 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 DDAH2O95865 285 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 CT45A8P0DMV1 189 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 CT45A9P0DMV2 189 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 IFNA8P32881 189 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 PIGAP37287 484 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 TSPAN7P41732 249 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 PSMD4P55036 377 aaKnown RBP15.63■□□□□ 0.09
COPS3-212ENST00000539941 TMBIM6P55061 237 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 E2F1Q01094 437 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 DGCR6Q14129 220 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 SF3A2Q15428 464 aaKnown RBP15.63■□□□□ 0.09
COPS3-212ENST00000539941 CSRP2Q16527 193 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 ANKDD1AQ495B1 522 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 CT45A2Q5DJT8 189 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 ANKRD34AQ69YU3 496 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 FIGNL1Q6PIW4 674 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 NPSR1Q6W5P4 371 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 ZNF836Q6ZNA1 936 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 HMGN2P46Q86SG4 172 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 OFCC1Q8IZS5 231 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 LINC00471Q8N535 108 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 MORN4Q8NDC4 146 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 SLC2A12Q8TD20 617 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 LRFN5Q96NI6 719 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 WFDC6Q9BQY6 131 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 EDEM2Q9BV94 578 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 FNDC11Q9BVV2 318 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 ITPAQ9BY32 194 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 POLR2J2Q9GZM3 115 aaKnown RBP15.63■□□□□ 0.09
COPS3-212ENST00000539941 POLR2J3Q9H1A7 115 aaKnown RBP15.63■□□□□ 0.09
COPS3-212ENST00000539941 LIN28AQ9H9Z2 209 aaKnown RBP15.63■□□□□ 0.09
COPS3-212ENST00000539941 APMAPQ9HDC9 416 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 ENOPH1Q9UHY7 261 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 DTX4Q9Y2E6 619 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 PCDHGB5Q9Y5G0 923 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 PCDHGA10Q9Y5H3 936 aa15.63■□□□□ 0.09
COPS3-212ENST00000539941 LOC100130705A0A1B0GUX0 176 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 VSTM2BA6NLU5 285 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 H3BMQ9 156 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 TMX2-CTNND1H3BSU7 103 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 FAAHO00519 579 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 ATXN8OSP0DMR3 200 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 AGXTP21549 392 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 PPICP45877 212 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 EFNA3P52797 238 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 RGS8P57771 180 aaPredicted RBP15.62■□□□□ 0.09
COPS3-212ENST00000539941 DCAF7P61962 342 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 ATP1A4Q13733 1029 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 ZNF846Q147U1 533 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 SPCS2Q15005 226 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 OXA1LQ15070 435 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 NPTX1Q15818 432 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.62■□□□□ 0.09
COPS3-212ENST00000539941 FLYWCH1Q4VC44 716 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 DCST1Q5T197 706 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 AGAP7PQ5VUJ5 663 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 SLC5A8Q8N695 610 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 ZNF721Q8TF20 911 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 COG8Q96MW5 612 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 FEVQ99581 238 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 CDC6Q99741 560 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 OR8D2Q9GZM6 311 aa15.62■□□□□ 0.09
COPS3-212ENST00000539941 ANKRD19PQ9H560 264 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms