RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 NRROSQ86YC3 692 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 POGLUT1Q8NBL1 392 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 MFSD9Q8NBP5 474 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 GRHL3Q8TE85 626 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 MSLNLQ96KJ4 702 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 C1QTNF2Q9BXJ5 285 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 ACTRT3Q9BYD9 372 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 TRAV27A0A087WT01 109 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 EPOPA6NHQ4 379 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 SMLR1H3BR10 107 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 POLR1CO15160 346 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 APODP05090 189 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 C5AR1P21730 350 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 NOS3P29474 1203 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 HCCSP53701 268 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 RPS21P63220 83 aaKnown RBP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 PGGHGQ32M88 737 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 PRRT3Q5FWE3 981 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 DDI2Q5TDH0 399 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF620Q6ZNG0 422 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 GDPGP1Q6ZNW5 385 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 NEIL3Q8TAT5 605 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 TIMM29Q9BSF4 260 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 FGF20Q9NP95 211 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 USP36Q9P275 1121 aaKnown RBP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 CLEC4AQ9UMR7 237 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 ALPK2Q86TB3 2170 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 MN1Q10571 1320 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 A0A1W2PPK0 400 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 B4DXG7 233 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 RASGRP1O95267 797 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF136P52737 540 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 TPBGQ13641 420 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 IL18Q14116 193 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 NDUFA9Q16795 377 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 CDC73Q6P1J9 531 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 BHLHB9Q6PI77 547 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 PAQR7Q86WK9 346 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 RFLNBQ8N5W9 214 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 TTLQ8NG68 377 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 SFXN5Q8TD22 340 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 RNF32Q9H0A6 362 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 OR51V1Q9H2C8 321 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 PCDHGB2Q9Y5G2 931 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 VPS13AQ96RL7 3174 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 TDRD6O60522 2096 aaKnown RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 TMEM129A0AVI4 362 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 C12orf71A8MTZ7 269 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 RFPL3O75679 317 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 CT62P0C5K7 136 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 GSTM3P21266 225 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 LSSP48449 732 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 OR10A3P58181 314 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 MRPS15P82914 257 aaKnown RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 Q5BKY6 102 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 RNASE12Q5GAN4 147 aaKnown RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF544Q6NX49 715 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 TMEM91Q6ZNR0 172 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 SYT9Q86SS6 491 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ASPGQ86U10 573 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 LRRC25Q8N386 305 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 OR13C5Q8NGS8 318 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 OR13C2Q8NGS9 318 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 OR51A7Q8NH64 312 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ACOT11Q8WXI4 607 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 WDFY2Q96P53 400 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 GAS2L1Q99501 681 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ATF6BQ99941 703 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 YIPF2Q9BWQ6 316 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 PBX4Q9BYU1 374 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 SRMSQ9H3Y6 488 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 PAQR5Q9NXK6 330 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 YBX2Q9Y2T7 364 aaKnown RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ATG2AQ2TAZ0 1938 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 GXYLT2A0PJZ3 443 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 PRR19A6NJB7 356 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 C5orf67F2Z3F1 127 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ADAM11O75078 769 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 COQ9O75208 318 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 CHRNB1P11230 501 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 PSKH1P11801 424 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 GABRA5P31644 462 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 KIR2DL1P43626 348 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 PLAURQ03405 335 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 SCN1BQ07699 218 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 DEFB110Q30KQ9 67 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ZFP69Q49AA0 526 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 EOGTQ5NDL2 527 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 MRPL2Q5T653 305 aaKnown RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 DGAT2L6Q6ZPD8 337 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF438Q7Z4V0 828 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ARIH2OSQ8N7S6 290 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 BMPERQ8N8U9 685 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 OR51L1Q8NGJ5 315 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF764Q96H86 408 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 GFM1Q96RP9 751 aaKnown RBP13.09□□□□□ -0.31
UBE3B-210ENST00000539599 PRSS27Q9BQR3 290 aa13.09□□□□□ -0.31
UBE3B-210ENST00000539599 MCOLN1Q9GZU1 580 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms