RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 ZNF780AO75290 641 aaPredicted RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 NGFRP08138 427 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 CSRP1P21291 193 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 DRD5P21918 477 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 TNFRSF17Q02223 184 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 GGTLC2Q14390 218 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 SUZ12Q15022 739 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 SF3A2Q15428 464 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 ARMC4Q5T2S8 1044 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 RSBN1Q5VWQ0 802 aaPredicted RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 FCRL6Q6DN72 434 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 THSD4Q6ZMP0 1018 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 OAFQ86UD1 273 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 RNF113BQ8IZP6 322 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 ZSCAN1Q8NBB4 408 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 ZFPM2Q8WW38 1151 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 AP3S1Q92572 193 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 GAL3ST3Q96A11 431 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 YIPF4Q9BSR8 244 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 FAIM2Q9BWQ8 316 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 GTPBP2Q9BX10 602 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 CLDND1Q9NY35 253 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 SERTAD3Q9UJW9 196 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 A0A087WV62 115 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 TBC1D3KA0A087X1G2 549 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 TBC1D3BA6NDS4 549 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 TBC1D3FA6NER0 549 aaPredicted RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 CPSF4LA6NMK7 179 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 CYR61O00622 381 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 IDH3BO43837 385 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 NR2F6P10588 404 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 PRG2P13727 222 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 S1PR1P21453 382 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 AZGP1P25311 298 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 NDUFS1P28331 727 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 PPP2R1BP30154 601 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 GJA4P35212 333 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 SSR2P43308 183 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 CDH11P55287 796 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 BTG1P62324 171 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 RUNX2Q13950 521 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 CST6Q15828 149 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 DUSP5Q16690 384 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 CRTC2Q53ET0 693 aaPredicted RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 ZNF684Q5T5D7 378 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 TBC1D3GQ6DHY5 549 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 DGLUCYQ7Z3D6 616 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 LHFPL3Q86UP9 236 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 GALNT12Q8IXK2 581 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 Q8N402 240 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 ASB12Q8WXK4 309 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 SMARCD2Q92925 531 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 CREB3L1Q96BA8 519 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 DIRAS2Q96HU8 199 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 C12orf66Q96MD2 445 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 MS4A4EQ96PG1 132 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 GON7Q9BXV9 100 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 MTHFD2LQ9H903 347 aaPredicted RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 ZFP64Q9NPA5 681 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 CMC2Q9NRP2 79 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 LYARQ9NX58 379 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 ZNF624Q9P2J8 865 aaPredicted RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 DEC1Q9P2X7 70 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 CLDN16Q9Y5I7 305 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 OR52A4PA6NMU1 304 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 ERI3O43414 337 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 ALPPL2P10696 532 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 MAP2K3P46734 347 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 MLLT1Q03111 559 aaPredicted RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 PRICKLE4Q2TBC4 344 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 ZFP69Q49AA0 526 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 HBMQ6B0K9 141 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 PAMR1Q6UXH9 720 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 GRAMD2AQ8IUY3 354 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 NRMQ8IXM6 262 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 TMEM99Q8N816 258 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 YIPF7Q8N8F6 280 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 ZFP41Q8N8Y5 198 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 KCT2Q8NC54 265 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 TEX47Q8TBZ9 253 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 ACOT12Q8WYK0 555 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 HERVK_113Q902F9 699 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 PMM1Q92871 262 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 KCTD12Q96CX2 325 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 GPR137Q96N19 417 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 GFI1Q99684 422 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 TTYH2Q9BSA4 534 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 MARCH7Q9H992 704 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 MRPS30Q9NP92 439 aaKnown RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 CALML5Q9NZT1 146 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 PTGFRNQ9P2B2 879 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 C19orf53Q9UNZ5 99 aaPredicted RBP6.44□□□□□ -1.38
PROM1-219ENST00000539194 NPTNQ9Y639 398 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 SLC22A7Q9Y694 548 aa6.44□□□□□ -1.38
PROM1-219ENST00000539194 GSAPA4D1B5 854 aa6.43□□□□□ -1.38
PROM1-219ENST00000539194 A8MV72 311 aaPredicted RBP6.43□□□□□ -1.38
PROM1-219ENST00000539194 LYRM1O43325 122 aa6.43□□□□□ -1.38
PROM1-219ENST00000539194 LATO43561 262 aa6.43□□□□□ -1.38
PROM1-219ENST00000539194 SH3BP5O60239 455 aa6.43□□□□□ -1.38
PROM1-219ENST00000539194 SLC19A2O60779 497 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms