RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 MAGEB1P43366 347 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 TBPL1P62380 186 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 DOC2AQ14183 400 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 HIST2H3PS2Q5TEC6 136 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 ZNF776Q68DI1 518 aaPredicted RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 C15orf39Q6ZRI6 1047 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SPATC1Q76KD6 591 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CCDC116Q8IYX3 515 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 TMEM102Q8N9M5 508 aaPredicted RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 PLPP5Q8NEB5 264 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 HUS1BQ8NHY5 278 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 C22orf15Q8WYQ4 148 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SPTSSAQ969W0 71 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 MSI2Q96DH6 328 aaKnown RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 RPL10LQ96L21 214 aaKnown RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 SMOQ99835 787 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 NKX6-2Q9C056 277 aaPredicted RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 RNF32Q9H0A6 362 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SLC6A14Q9UN76 642 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 MRPS17Q9Y2R5 130 aaKnown RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 SLC45A1Q9Y2W3 748 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 A0A1W2PPK0 400 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 GJE1A6NN92 205 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 DPM1O60762 260 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SYNGR4O95473 234 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 PSMB1P20618 241 aaKnown RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 CLDN10P78369 228 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SPRED3Q2MJR0 410 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 KIAA0319Q5VV43 1072 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SLC46A3Q7Z3Q1 461 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CELF5Q8N6W0 485 aaKnown RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 ZFP41Q8N8Y5 198 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 DPH2Q9BQC3 489 aaPredicted RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 OR1A2Q9Y585 309 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 WIF1Q9Y5W5 379 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SNED1Q8TER0 1413 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 RNF212BA8MTL3 300 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 C8orf89P0DMQ9 161 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CNR1P21554 472 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 ZNF136P52737 540 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 AKR1C2P52895 323 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 GPR50Q13585 617 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CNN3Q15417 329 aaKnown RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 TMEM225Q6GV28 225 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 LRFN4Q6PJG9 635 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SULF2Q8IWU5 870 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 RDH10Q8IZV5 341 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 OR51A7Q8NH64 312 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SH3RF2Q8TEC5 729 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 ZNF681Q96N22 645 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 BTBD2Q9BX70 525 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 FBXO8Q9NRD0 319 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 MYH3P11055 1940 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 ZCWPW2A0A1B0GU75 182 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 TMEM127O75204 238 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 PMS2P2O95744 297 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SMPD1P17405 629 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 POLR2CP19387 275 aaPredicted RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 ELK1P19419 428 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CALCRP30988 508 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SELENOVP59797 346 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 ERVK-16P61578 105 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 RAB1AP62820 205 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SCGB2A2Q13296 93 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 ASAH1Q13510 395 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 ZNF805Q5CZA5 627 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 TCTE1Q5JU00 501 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 PAGE3Q5JUK9 113 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 TANGO2Q6ICL3 276 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 LYPD4Q6UWN0 246 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 TMEM107Q6UX40 140 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CD300LGQ6UXG3 332 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 VASH1Q7L8A9 365 aaPredicted RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 NRARPQ7Z6K4 114 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 RNF113BQ8IZP6 322 aaKnown RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 OR5D14Q8NGL3 314 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 TANKQ92844 425 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SAMD8Q96LT4 415 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 METTL17Q9H7H0 456 aaPredicted RBP6.54□□□□□ -1.36
SORT1-209ENST00000538502 CAMK2AQ9UQM7 478 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 RASD1Q9Y272 281 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SLC22A7Q9Y694 548 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 RIMBP3CA6NJZ7 1639 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 RIMBP3BA6NNM3 1639 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 RIMBP3Q9UFD9 1639 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CPOXP36551 454 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CX3CR1P49238 355 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CAV2P51636 162 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 GPR176Q14439 515 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 MLC1Q15049 377 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 INAVAQ3KP66 663 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 CYP27C1Q4G0S4 372 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 ARHGAP40Q5TG30 622 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 APOOLQ6UXV4 268 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 NRMQ8IXM6 262 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 ZFP82Q8N141 532 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 TLR9Q9NR96 1032 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 PGAP2Q9UHJ9 254 aa6.54□□□□□ -1.36
SORT1-209ENST00000538502 SERTAD3Q9UJW9 196 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms