RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SYT11Q9BT88 431 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 LRRN3Q9H3W5 708 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SPHK1Q9NYA1 384 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TBC1D29Q9UFV1 150 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 RNF6Q9Y252 685 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 MRPS2Q9Y399 296 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 IER3IP1Q9Y5U9 82 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 BRWD3Q6RI45 1802 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 LRP5O75197 1615 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 USP54Q70EL1 1684 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TRAV27A0A087WT01 109 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 DPPA5A6NC42 116 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SLC22A31A6NKX4 558 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 FOXE1O00358 373 aaPredicted RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 ANKRD28O15084 1053 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CCNKO75909 580 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 KCNK5O95279 499 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 B3GALT4O96024 378 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 HTR3AP46098 478 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 NOVA1P51513 510 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 ACTA2P62736 377 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ERVK-25P63136 954 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ACTG2P63267 376 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 RBM39Q14498 530 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 FAM205BPQ63HN1 556 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 PAPD4Q6PIY7 484 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 STX12Q86Y82 276 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 MINDY1Q8N5J2 469 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CYB561A3Q8NBI2 242 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SFXN5Q8TD22 340 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 DUSP19Q8WTR2 217 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 MUCL1Q96DR8 90 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ARL5BQ96KC2 179 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 RDH12Q96NR8 316 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 GSKIPQ9P0R6 139 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 FBXL3Q9UKT7 428 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 LOXL2Q9Y4K0 774 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 PLSCR5A0PG75 271 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 A6NIZ1 184 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ZNF850A8MQ14 1090 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SYT7O43581 403 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 XPNPEP2O43895 674 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SUSD5O60279 629 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 MRPL33O75394 65 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 HTR3BO95264 441 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 C8BP07358 591 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TMEM225BP0DP42 221 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 RAP1BP61224 184 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 RAP1AP62834 184 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TRA2BP62995 288 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 GPLD1P80108 840 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 MRPL58Q14197 206 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 MELKQ14680 651 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ZMYND11Q15326 602 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TMEM176BQ3YBM2 270 aaPredicted RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 TMEM178AQ8NBL3 297 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TMEM239Q8WW34 195 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 OR10A5Q9H207 317 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 C12orf49Q9H741 205 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 NMNAT1Q9HAN9 279 aaPredicted RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 PLEK2Q9NYT0 353 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 DNAJB11Q9UBS4 358 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 REV1Q9UBZ9 1251 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 PMF1-BGLAPU3KQ54 211 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ANKRD30BLA7E2S9 258 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 PLOD2O00469 737 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 PHYHO14832 338 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ORC5O43913 435 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 APOC1P02654 83 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TPOP07202 933 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 BCL6P41182 706 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 KCNAB2Q13303 367 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ZNF750Q32MQ0 723 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CCSMST1Q4G0I0 132 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 FAM109BQ6ICB4 259 aaPredicted RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 FAM111BQ6SJ93 734 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 OR4K5Q8NGD3 323 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 OR5M1Q8NGP8 315 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CASTOR1Q8WTX7 329 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 NXF5Q9H1B4 397 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 MAGIXQ9H6Y5 334 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 FOLH1BQ9HBA9 442 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 UBQLN4Q9NRR5 601 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TRNAU1APQ9NX07 287 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 NXT1Q9UKK6 140 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 BAIAP2Q9UQB8 552 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 POLHQ9Y253 713 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SCN9AQ15858 1988 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SIPA1L3O60292 1781 aaPredicted RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 IGLV3-10A0A075B6K4 115 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 A0A1B0GX78 115 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 TTLL8A6PVC2 850 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 FAM166BA8MTA8 275 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 SLC22A1O15245 554 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 SNNO75324 88 aaPredicted RBP5.03□□□□□ -1.61
LRP6-203ENST00000538239 ALOX12BO75342 701 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 RGS9O75916 674 aaPredicted RBP5.03□□□□□ -1.61
LRP6-203ENST00000538239 PRKXP51817 358 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 FXYD6P3P58550 94 aa5.03□□□□□ -1.61
LRP6-203ENST00000538239 MFSD13AQ14CX5 517 aa5.03□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms