RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 KARSQ15046 597 aaKnown RBP2.55□□□□□ -2
CCDC7-208ENST00000537047 UBE2V2Q15819 145 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 OLFM4Q6UX06 510 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 NET1Q7Z628 596 aaPredicted RBP2.55□□□□□ -2
CCDC7-208ENST00000537047 ALLCQ8N6M5 410 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 NEK11Q8NG66 645 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 EXOC6Q8TAG9 804 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 PARD3Q8TEW0 1356 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 MYDGFQ969H8 173 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 PSMG2Q969U7 264 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 TMEM80Q96HE8 168 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 ELMO2Q96JJ3 720 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 GDAP2Q9NXN4 497 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 TRIM10Q9UDY6 481 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 PPIAL4AQ9Y536 164 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 ZMYM6O95789 1325 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 SYCE3A1L190 88 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 FBLL1A6NHQ2 334 aaKnown RBP2.54□□□□□ -2
CCDC7-208ENST00000537047 DLGAP1O14490 977 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 KINO60870 393 aaKnown RBP2.54□□□□□ -2
CCDC7-208ENST00000537047 IGKV1-17P01599 117 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 SEMG1P04279 462 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 VDAC1P21796 283 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 NTSP30990 170 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 CDH5P33151 784 aaPredicted RBP2.54□□□□□ -2
CCDC7-208ENST00000537047 GNPDA1P46926 289 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 MRPS6P82932 125 aaKnown RBP2.54□□□□□ -2
CCDC7-208ENST00000537047 OTUD4Q01804 1114 aaKnown RBP2.54□□□□□ -2
CCDC7-208ENST00000537047 DPYSL3Q14195 570 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 SCYL2Q6P3W7 929 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 BTNL3Q6UXE8 466 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 ZNF562Q6V9R5 426 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 PPP1R27Q86WC6 154 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 IFNEQ86WN2 208 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 ARFGAP2Q8N6H7 521 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 OR9A1PQ8NGU1 263 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 NFKBIZQ9BYH8 718 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 SIRPDQ9H106 197 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 MARCH5Q9NX47 278 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 GALPQ9UBC7 116 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 L3MBTL1Q9Y468 752 aa2.54□□□□□ -2
CCDC7-208ENST00000537047 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.54□□□□□ -2
CCDC7-208ENST00000537047 ANKRD30BQ9BXX2 1392 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 RPGRIP1LQ68CZ1 1315 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 ARHGAP42A6NI28 874 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 H3BTX0 84 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 CASKO14936 926 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 TM9SF1O15321 606 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 BBOX1O75936 387 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 CABYRO75952 493 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 JCHAINP01591 159 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 RALAP11233 206 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 CD1BP29016 333 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 GPC3P51654 580 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 RND3P61587 244 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 C17orf67Q0P5P2 114 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 LRIT3Q3SXY7 679 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 PAQR9Q6ZVX9 377 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 LRRC70Q7Z2Q7 622 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 TAF8Q7Z7C8 310 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 CNTN4Q8IWV2 1026 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 CCDC36Q8IYA8 594 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 TMEM61Q8N0U2 210 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 BPIFB2Q8N4F0 458 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 CCNYQ8ND76 341 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 ATP6V0A1Q93050 837 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 CABS1Q96KC9 395 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 SPATA13Q96N96 652 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 WRAP53Q9BUR4 548 aaKnown RBP2.53□□□□□ -2
CCDC7-208ENST00000537047 RPAP3Q9H6T3 665 aaPredicted RBP2.53□□□□□ -2
CCDC7-208ENST00000537047 CYP39A1Q9NYL5 469 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 CD274Q9NZQ7 290 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 NOL7Q9UMY1 257 aaKnown RBP2.53□□□□□ -2
CCDC7-208ENST00000537047 DUSP12Q9UNI6 340 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 STRAPQ9Y3F4 350 aaKnown RBP2.53□□□□□ -2
CCDC7-208ENST00000537047 TEX264Q9Y6I9 313 aa2.53□□□□□ -2
CCDC7-208ENST00000537047 RAD54L2Q9Y4B4 1467 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 MTCL1Q9Y4B5 1905 aaKnown RBP2.52□□□□□ -2.01
CCDC7-208ENST00000537047 IGHV7-81A0A0B4J1V7 117 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 SAGE2PA6NJ88 616 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 FAM166BA8MTA8 275 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 SERPINE3A8MV23 424 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 C19orf81C9J6K1 198 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 IMPA2O14732 288 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 ALOX15BO15296 676 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 ZBTB14O43829 449 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 H2AFXP16104 143 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-208ENST00000537047 TSPAN8P19075 237 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 ADORA2BP29275 332 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 HTR5AP47898 357 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 NUP107P57740 925 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 OSTNP61366 133 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 ACTN3Q08043 901 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-208ENST00000537047 CCDC40Q4G0X9 1142 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 OR8G2PQ6IF36 304 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 FAM159AQ6UWV7 190 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 DNM1P46Q6ZS02 220 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 MIER3Q7Z3K6 550 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 C20orf203Q8NBC4 194 aa2.52□□□□□ -2.01
CCDC7-208ENST00000537047 TRUB1Q8WWH5 349 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms