RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 RIPPLY2Q5TAB7 128 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MSANTD1Q6ZTZ1 278 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GDF7Q7Z4P5 450 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MTDHQ86UE4 582 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ANKRD46Q86W74 232 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FUNDC1Q8IVP5 155 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PM20D2Q8IYS1 436 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NUP43Q8NFH3 380 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 BCAS4Q8TDM0 211 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PIK3R3Q92569 461 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SPDL1Q96EA4 605 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 RTN4RQ9BZR6 473 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 RMND5AQ9H871 391 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SIRT3Q9NTG7 399 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CAMK2AQ9UQM7 478 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CAPN7Q9Y6W3 813 aa16.23■□□□□ 0.19
TNFRSF1A-209ENST00000536717 POLQO75417 2590 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TTC36A6NLP5 189 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SLC22A2O15244 555 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SCO2O43819 266 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SCN2BO60939 215 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NKX2-2O95096 273 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 IGKV1D-16P01601 117 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MSX1P28360 303 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SRD5A2P31213 254 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PRKAG1P54619 331 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CLECL1Q8IZS7 167 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 NAXEQ8NCW5 288 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 OR4A15Q8NGL6 344 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 OR14L1PQ8NHC6 308 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 VPS33AQ96AX1 596 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 BTNL2Q9UIR0 455 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SNX8Q9Y5X2 465 aa16.22■□□□□ 0.19
TNFRSF1A-209ENST00000536717 EMC8O43402 210 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 RRP9O43818 475 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 DCTN3O75935 186 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CPSF4O95639 269 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ACTL6AO96019 429 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ACP2P11117 423 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 RFX3P48380 749 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GFRA1P56159 465 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 HBA1P69905 142 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PRR5P85299 388 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 KLF10Q13118 480 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MAPRE2Q15555 327 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MEX3BQ6ZN04 569 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SZRD1Q7Z422 152 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 IFNEQ86WN2 208 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ANKS4BQ8N8V4 417 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FADS6Q8N9I5 356 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CDRT4Q8N9R6 151 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 SLC16A11Q8NCK7 471 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CCDC197Q8NCU1 140 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TNIP2Q8NFZ5 429 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PSMA8Q8TAA3 256 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FBXO30Q8TB52 745 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 GPR151Q8TDV0 419 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TSPEARQ8WU66 669 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FAM120BQ96EK7 910 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 RMND5BQ96G75 393 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 CCDC115Q96NT0 180 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MS4A4EQ96PG1 132 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PANX1Q96RD7 426 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 C3orf14Q9HBI5 128 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 TAS2R10Q9NYW0 307 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 PPP4R1LQ9P1A2 415 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MRTO4Q9UKD2 239 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ABCG2Q9UNQ0 655 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 MRPS18CQ9Y3D5 142 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 HEATR5AQ86XA9 2040 aa16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 ANKHD1Q8IWZ3 2542 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-209ENST00000536717 FAM47E-STBD1D6RA91 191 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CEACAM8P31997 349 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 TIMP3P35625 211 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 PSMD4P55036 377 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 SPDYE7PQ495Y7 208 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 VPS26BQ4G0F5 336 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 EXOSC6Q5RKV6 272 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 NSUN5P2Q63ZY6 315 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 MFSD12Q6NUT3 480 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 LACC1Q8IV20 430 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 SLC9A6Q92581 669 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 C16orf58Q96GQ5 468 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 ITCHQ96J02 903 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 ARMCX1Q9P291 453 aa16.2■□□□□ 0.18
TNFRSF1A-209ENST00000536717 A0A1W2PP18 115 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 RFXANKO14593 260 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 ANGPT2O15123 496 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 ZIC3O60481 467 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 KCNH1O95259 989 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CPN1P15169 458 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CAPN3P20807 821 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 DPP4P27487 766 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 SOAT1P35610 550 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 DUSP5Q16690 384 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 C6orf10Q5SRN2 563 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 APOOLQ6UXV4 268 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 GALNT10Q86SR1 603 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 TRIML2Q8N7C3 387 aa16.19■□□□□ 0.18
TNFRSF1A-209ENST00000536717 OR2M3Q8NG83 312 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms