RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 LHFPL3Q86UP9 236 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TRIM69Q86WT6 500 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NAGSQ8N159 534 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SAMD12Q8N8I0 201 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 GPR26Q8NDV2 337 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 OR10D4PQ8NGN7 298 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 OR5M9Q8NGP3 310 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NANOS1Q8WY41 292 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 CENPIQ92674 756 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 HGDQ93099 445 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 RFT1Q96AA3 541 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 BSCL2Q96G97 398 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 OR52E6Q96RD3 313 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 RAD9AQ99638 391 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ZNF670Q9BS34 389 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ZPBPQ9BS86 351 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 KATNBL1Q9H079 304 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TSPAN10Q9H1Z9 355 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 SIRT7Q9NRC8 400 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TCEAL9Q9UHQ7 104 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PCDHB10Q9UN67 800 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 LSM2Q9Y333 95 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 A0A1W2PPH5 198 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TMEM218A2RU14 115 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NPEPPSL1A6NEC2 478 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PROB1E7EW31 1015 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ARNTLO00327 626 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SPINT1O43278 529 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 CA11O75493 328 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 VNN2O95498 520 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 HLA-DQB1P01920 261 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 CXCL10P02778 98 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ARG1P05089 322 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PCCBP05166 539 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 RHOP08100 348 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ETFAP13804 333 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SPI1P17947 270 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PTNP21246 168 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 AHCYP23526 432 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 AKAP5P24588 427 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 DDTP30046 118 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 APLNRP35414 380 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PPM1AP35813 382 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SLC1A3P43003 542 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NR0B1P51843 470 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 LUMP51884 338 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 PNLIPRP2P54317 469 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ERVPABLB-1P60509 514 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PSMA6P60900 246 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 RAB2AP61019 212 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SORDQ00796 357 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 MEF2DQ14814 521 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 GOLGA7BQ2TAP0 167 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SCGB2B2Q4G0G5 96 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 LIPJQ5W064 366 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 CXorf57Q6NSI4 855 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 MRNIPQ6NTE8 343 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SWSAP1Q6NVH7 229 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SERPINA13PQ6UXR4 307 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 UNQ6126/PRO20091Q6UXV3 157 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 IKBIPQ70UQ0 350 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NDUFAF7Q7L592 441 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 REC114Q7Z4M0 266 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 S100A7AQ86SG5 101 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SCD5Q86SK9 330 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ACOT1Q86TX2 421 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 MARCH9Q86YJ5 346 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 MISPQ8IVT2 679 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 CPXCR1Q8N123 301 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NAXEQ8NCW5 288 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 OR10G2Q8NGC3 310 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 OR4D9Q8NGE8 314 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 BBS10Q8TAM1 723 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 KCTD7Q96MP8 289 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SMIM14Q96QK8 99 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 CYP2S1Q96SQ9 504 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PITX2Q99697 317 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SOSTQ9BQB4 213 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 FUZQ9BT04 418 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 DPAGT1Q9H3H5 408 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NSUN3Q9H649 340 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 TPT1P8Q9HAU6 139 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 BARX1Q9HBU1 254 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 NEUROD4Q9HD90 331 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 H2AFY2Q9P0M6 372 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 KLHL9Q9P2J3 617 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 RPS6KB2Q9UBS0 482 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ST3GAL5Q9UNP4 418 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 MSRB2Q9Y3D2 182 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PRAMEF25A6NGN4 478 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 DUXAA6NLW8 204 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TNFRSF11BO00300 401 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 MBTPS2O43462 519 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 SMPD2O60906 423 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ALOX12BO75342 701 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 LATS1O95835 1130 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 OR12D1P0DN82 309 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 CD1DP15813 335 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ADORA2BP29275 332 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 SDHAP31040 664 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms