RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 H3BNH8 94 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 PRRG2O14669 202 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 GNB5O14775 395 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 NDUFB5O43674 189 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 SHOX2O60902 331 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-205ENST00000536255 CBR3O75828 277 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 OXSR1O95747 527 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-205ENST00000536255 FAM107AO95990 144 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 NPPAP01160 153 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 IGHG3P01860 377 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 CELA3AP09093 270 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 RFPL3SP0C7P2 107 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 NR2F1P10589 423 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 GP1BBP13224 206 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 HOXB9P17482 250 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-205ENST00000536255 DCTP40126 519 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 ATP12AP54707 1039 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 DSTNP60981 165 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 C17orf67Q0P5P2 114 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 RGNQ15493 299 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 GPAT3Q53EU6 434 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 COX20Q5RI15 118 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 GKAP1Q5VSY0 366 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-205ENST00000536255 DLEU7Q6UYE1 221 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 SNX32Q86XE0 403 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 PLCZ1Q86YW0 608 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 OR4C3Q8NH37 302 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 FAM57AQ8TBR7 257 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 ROPN1LQ96C74 230 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 CCT8L2Q96SF2 557 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 CGREF1Q99674 301 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 LDAHQ9H6V9 325 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 FBXO34Q9NWN3 711 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 SLC25A37Q9NYZ2 338 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 FLRT3Q9NZU0 649 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 VAPAQ9P0L0 249 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 SLAMF8Q9P0V8 285 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 C15orf41Q9Y2V0 281 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 WDR45Q9Y484 360 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 LIPGQ9Y5X9 500 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 TRBV5-3A0A0A0MS03 114 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 LOC100653049A0A140TA62 436 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 MRASO14807 208 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 TRAPPC6AO75865 159 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 DCTN3O75935 186 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 KRT34O76011 436 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 ANGPTL1O95841 491 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 CD1EP15812 388 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 GCKP35557 465 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 MVDP53602 400 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 CRISP3P54108 245 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 GAS1P54826 345 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 TOMM20Q15388 145 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 GPR68Q15743 365 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 TRMT5Q32P41 509 aaKnown RBP12.33□□□□□ -0.44
RPAIN-205ENST00000536255 FNDC7Q5VTL7 733 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 REP15Q6BDI9 236 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 LRRC74BQ6ZQY2 392 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 MAMDC2Q7Z304 686 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-205ENST00000536255 MTERF4Q7Z6M4 381 aaKnown RBP12.33□□□□□ -0.44
RPAIN-205ENST00000536255 ZAR1Q86SH2 424 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 MARCH3Q86UD3 253 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 CD163Q86VB7 1156 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 RETREG3Q86VR2 466 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 DOLPP1Q86YN1 238 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 MSRB3Q8IXL7 192 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 ZNF619Q8N2I2 560 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 OR4K17Q8NGC6 315 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 PMM1Q92871 262 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 CMTM5Q96DZ9 223 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 GNRHR2Q96P88 292 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 SH3GL1Q99961 368 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 CCDC106Q9BWC9 280 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 PTGES2Q9H7Z7 377 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 ACKR4Q9NPB9 350 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 GID8Q9NWU2 228 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 MEMO1Q9Y316 297 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 UTP20O75691 2785 aaKnown RBP12.33□□□□□ -0.44
RPAIN-205ENST00000536255 NINQ8N4C6 2090 aa12.33□□□□□ -0.44
RPAIN-205ENST00000536255 SPTBN1Q01082 2364 aaKnown RBP12.32□□□□□ -0.44
RPAIN-205ENST00000536255 A0A1B0GVC2 190 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 C2orf72A6NCS6 295 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 OR14I1A6ND48 311 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 FBP2O00757 339 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 KIAA0513O60268 411 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 SUSD5O60279 629 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 HCN1O60741 890 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 H6PDO95479 791 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 CLDN1O95832 211 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 TPOP07202 933 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 ESRRAP11474 423 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-205ENST00000536255 BMP2P12643 396 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 ETFAP13804 333 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 MSX1P28360 303 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 GANABQ14697 944 aaKnown RBP12.32□□□□□ -0.44
RPAIN-205ENST00000536255 ZNF630Q2M218 657 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-205ENST00000536255 RUNDC3AQ59EK9 446 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 GCNT6Q5T4J0 391 aa12.32□□□□□ -0.44
RPAIN-205ENST00000536255 AP1ARQ63HQ0 302 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms