RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 HS3ST1O14792 307 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 CRLF1O75462 422 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 GCM2O75603 506 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 UTS2O95399 124 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 DANCRP0C864 163 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 PABPC4LP0CB38 370 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 TSPAN8P19075 237 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 ELK4P28324 431 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 HMOX2P30519 316 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 EIF1P41567 113 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 NCBP2P52298 156 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 SLC29A2Q14542 456 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 MLC1Q15049 377 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 GTF2IRD2BQ6EKJ0 949 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 TRMT10CQ7L0Y3 403 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 GTF2IRD2Q86UP8 949 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 TRABD2AQ86V40 505 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 GABRG1Q8N1C3 465 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 CDRT4Q8N9R6 151 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 OR6Y1Q8NGX8 325 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 CEP70Q8NHQ1 597 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 PSMA8Q8TAA3 256 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 MTERF3Q96E29 417 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 GIMAP5Q96F15 307 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 IQCGQ9H095 443 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 DDX18Q9NVP1 670 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 DCDC2Q9UHG0 476 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 KIAA1324LA8MWY0 1029 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 G3V2L1 256 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 DNAJA2O60884 412 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 NME6O75414 186 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 KCNH1O95259 989 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 IGKV1D-16P01601 117 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 JUNP05412 331 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 LINGO3P0C6S8 592 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 PRPS2P11908 318 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 NTSP30990 170 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 SLC6A8P48029 635 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 C2orf80Q0P641 193 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 P2RY6Q15077 328 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 RNPS1Q15287 305 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 PLPPR5Q32ZL2 321 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 C1QTNF12Q5T7M4 302 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 NOXRED1Q6NXP6 359 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 SEZ6L2Q6UXD5 910 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 SYT10Q6XYQ8 523 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 ZNF704Q6ZNC4 412 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 FRMD7Q6ZUT3 714 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 Q71RC1 249 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 CXXC5Q7LFL8 322 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 MTERF4Q7Z6M4 381 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 MARCH3Q86UD3 253 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 UBQLNLQ8IYU4 475 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 STEAP2Q8NFT2 490 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 OR4C3Q8NH37 302 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 OR10D3Q8NH80 312 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 RNF128Q8TEB7 428 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 TMEM171Q8WVE6 324 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 CCT7Q99832 543 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 TACO1Q9BSH4 297 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 TXLNGYQ9BZA5 131 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 TBL1XR1Q9BZK7 514 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 MIEF1Q9NQG6 463 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 PFDN4Q9NQP4 134 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 UBQLN4Q9NRR5 601 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 DUSP22Q9NRW4 184 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 FLRT3Q9NZU0 649 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 SENP1Q9P0U3 644 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 ADAM21Q9UKJ8 722 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 MCTS1Q9ULC4 181 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 SNX8Q9Y5X2 465 aa10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 CHD3Q12873 2000 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-206ENST00000535668 EXOC1LA0A1B0GW35 172 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 A0A1W2PRB8 838 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 TRIM64A6NGJ6 449 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 TRIM64BA6NI03 449 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 H3BML4 177 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 SCO2O43819 266 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 NTN1O95631 604 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 SERPINB4P48594 390 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 FOXA1P55317 472 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 SUMO3P55854 103 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 ZNF155Q12901 538 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 GRAMD1BQ3KR37 738 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 SLC25A53Q5H9E4 307 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 TMEM107Q6UX40 140 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 ZYG11AQ6WRX3 759 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 ZNF550Q7Z398 422 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 STK32CQ86UX6 486 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 TDRPQ86YL5 185 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 OR2V1Q8NHB1 315 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 LILRB1Q8NHL6 650 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 HSD17B8Q92506 261 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 ZBED6CLQ96FA7 236 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 UBTD1Q9HAC8 227 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 BCO1Q9HAY6 547 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 MED17Q9NVC6 651 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 EMCNQ9ULC0 261 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 TMED5Q9Y3A6 229 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms