RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 MESP1Q9BRJ9 268 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 TMEM121BQ9BXQ6 578 aaPredicted RBP11.41□□□□□ -0.58
SCARB1-204ENST00000535005 MMP27Q9H306 513 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 SSUH2Q9Y2M2 353 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 SNX8Q9Y5X2 465 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 MRPS18BQ9Y676 258 aaKnown RBP11.41□□□□□ -0.58
SCARB1-204ENST00000535005 IGHV3-20A0A0C4DH32 117 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 ASNA1O43681 348 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 COX6A1P12074 109 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 NCK1P16333 377 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 IL7RP16871 459 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 PPIBP23284 216 aaKnown RBP11.4□□□□□ -0.58
SCARB1-204ENST00000535005 OTX2P32243 289 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 NUP214P35658 2090 aaPredicted RBP11.4□□□□□ -0.58
SCARB1-204ENST00000535005 ST13P50502 369 aaKnown RBP11.4□□□□□ -0.58
SCARB1-204ENST00000535005 ISL1P61371 349 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 CSNK2BP67870 215 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 VAC14Q08AM6 782 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 IL10RAQ13651 578 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 ZIK1Q3SY52 487 aaPredicted RBP11.4□□□□□ -0.58
SCARB1-204ENST00000535005 SPDYE7PQ495Y7 208 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 SAXO2Q658L1 398 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 DNAJC14Q6Y2X3 702 aaPredicted RBP11.4□□□□□ -0.58
SCARB1-204ENST00000535005 NDUFAF7Q7L592 441 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 EID3Q8N140 333 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF615Q8N8J6 731 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 B3GNT7Q8NFL0 401 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 OR1N1Q8NGS0 311 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 SLC2A12Q8TD20 617 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF721Q8TF20 911 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 KCNE4Q8WWG9 221 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 SLC35A5Q9BS91 424 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 SEMA4CQ9C0C4 833 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 HOXD1Q9GZZ0 328 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 GABARAPL1Q9H0R8 117 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 CCDC86Q9H6F5 360 aaKnown RBP11.4□□□□□ -0.58
SCARB1-204ENST00000535005 ZCCHC3Q9NUD5 404 aaKnown RBP11.4□□□□□ -0.58
SCARB1-204ENST00000535005 ERVK-19Q9WJR5 959 aa11.4□□□□□ -0.58
SCARB1-204ENST00000535005 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 LOC100130705A0A1B0GUX0 176 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 FAM172BPA6NC97 362 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 CLDN24A6NM45 220 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 HRKO00198 91 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 CLIC1O00299 241 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 PRKD3O94806 890 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 KRT75O95678 551 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 CLPSP04118 112 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 SOAT1P35610 550 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 PGDP52209 483 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 TPTEP56180 551 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 SLC26A5P58743 744 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 IFITM3Q01628 133 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 EEF1A2Q05639 463 aaKnown RBP11.39□□□□□ -0.59
SCARB1-204ENST00000535005 DUSP8Q13202 625 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 KEAP1Q14145 624 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 EXOSC6Q5RKV6 272 aaKnown RBP11.39□□□□□ -0.59
SCARB1-204ENST00000535005 ATAD3BQ5T9A4 648 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 ZCCHC12Q6PEW1 402 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 C6orf120Q7Z4R8 191 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 MRGPREQ86SM8 312 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 VASH2Q86V25 355 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 SLC22A16Q86VW1 577 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 NUP43Q8NFH3 380 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 HOXB13Q92826 284 aaPredicted RBP11.39□□□□□ -0.59
SCARB1-204ENST00000535005 GIMAP5Q96F15 307 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 CPPED1Q9BRF8 314 aaPredicted RBP11.39□□□□□ -0.59
SCARB1-204ENST00000535005 CNPPD1Q9BV87 410 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 DGCR6LQ9BY27 220 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 DUSP21Q9H596 190 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 KAT8Q9H7Z6 458 aaKnown RBP11.39□□□□□ -0.59
SCARB1-204ENST00000535005 TPT1P8Q9HAU6 139 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 GPATCH2Q9NW75 528 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 SCN3BQ9NY72 215 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF229Q9UJW7 825 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 APC2O95996 2303 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 OR6C76A6NM76 312 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 PRAMEF2O60811 474 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 INMTO95050 263 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 HPP00738 406 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 GPX2P18283 190 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 SSTR4P31391 388 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 MVDP53602 400 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 SLC37A1P57057 533 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 CD300CQ08708 224 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 KCNAB2Q13303 367 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 EXT1Q16394 746 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 CTU2Q2VPK5 515 aaKnown RBP11.39□□□□□ -0.59
SCARB1-204ENST00000535005 PLAG1Q6DJT9 500 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 GPR155Q7Z3F1 870 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 NANOGNBQ7Z5D8 188 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 BTLAQ7Z6A9 289 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 APCDD1LQ8NCL9 501 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 OR52R1Q8NGF1 315 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 OR52N2Q8NGI0 321 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 M1APQ8TC57 530 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 DOK4Q8TEW6 326 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 IPCEF1Q8WWN9 437 aaPredicted RBP11.39□□□□□ -0.59
SCARB1-204ENST00000535005 MS4A4EQ96PG1 132 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 NUDT9Q9BW91 350 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 AMBRA1Q9C0C7 1298 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms