RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 NEIL2Q969S2 332 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF566Q969W8 418 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 ULK4Q96C45 1275 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 LMAN2LQ9H0V9 348 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 DZANK1Q9NVP4 752 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 WWOXQ9NZC7 414 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 TINAGQ9UJW2 476 aa8.48□□□□□ -1.05
SF3B2-216ENST00000534765 DCHS1Q96JQ0 3298 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 PPM1DO15297 605 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 C1orf105O95561 183 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 OPN1SWP03999 348 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 PRNPP04156 253 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 FABP3P05413 133 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 KLK3P07288 261 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 SPP1P10451 314 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 CXCL3P19876 107 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 AP1S2P56377 157 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 CDC42P60953 191 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 ATXN7L3Q14CW9 347 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 RAB30Q15771 203 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 TMEM52BQ4KMG9 183 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 TIGD3Q6B0B8 471 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 OR1M1Q8NGA1 313 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 NETO1Q8TDF5 533 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 WFIKKN2Q8TEU8 576 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 ZDHHC1Q8WTX9 485 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 WNT2BQ93097 391 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 ZBED6CLQ96FA7 236 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 RBP7Q96R05 134 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 MTERF1Q99551 399 aaKnown RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 SPATA5L1Q9BVQ7 753 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 SUCNR1Q9BXA5 334 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 EBPLQ9BY08 206 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 DNTTIP1Q9H147 329 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 OBP2AQ9NY56 170 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 VAPAQ9P0L0 249 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 MGAT4CQ9UBM8 478 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 EXO1Q9UQ84 846 aaKnown RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 ASF1AQ9Y294 204 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 BDP1A6H8Y1 2624 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 CLCA1A8K7I4 914 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 UPK1AO00322 258 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 PLA2G10O15496 165 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 MLYCDO95822 493 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 GGT1P19440 569 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 IGFALSP35858 605 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 CDKN2CP42773 168 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 CDH12P55289 794 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 CDK3Q00526 305 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 SLC3A1Q07837 685 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 DDX39BQ13838 428 aaKnown RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 GPR155Q7Z3F1 870 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 PDZD3Q86UT5 571 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 RNF130Q86XS8 419 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 TRAPPC5Q8IUR0 188 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 SYT14Q8NB59 555 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 CCDC115Q96NT0 180 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 CDCA3Q99618 268 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 C19orf43Q9BQ61 176 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 AICDAQ9GZX7 198 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 OR52A5Q9H2C5 316 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 DPAGT1Q9H3H5 408 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 SLC25A37Q9NYZ2 338 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF69Q9UC07 566 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 SLC6A14Q9UN76 642 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 OR6C65A6NJZ3 312 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 SAP18O00422 153 aaKnown RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 AKAP8O43823 692 aaKnown RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 STK16O75716 305 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 KLF8O95600 359 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 OR56A5P0C7T3 313 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 GPR1P46091 355 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 RAB2AP61019 212 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 RAE1P78406 368 aaKnown RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 TDGQ13569 410 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 PROX2Q3B8N5 592 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 SFRP4Q6FHJ7 346 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 IL20RBQ6UXL0 311 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 DLEU7Q6UYE1 221 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 LINC01555Q8NAE3 123 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 OR56A4Q8NGH8 313 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 OR5J2Q8NH18 312 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 UBTD2Q8WUN7 234 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 MED8Q96G25 268 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF251Q9BRH9 671 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 HDAC8Q9BY41 377 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 RDH14Q9HBH5 336 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 VNN3Q9NY84 501 aa8.47□□□□□ -1.05
SF3B2-216ENST00000534765 MYEF2Q9P2K5 600 aaKnown RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 COLQQ9Y215 455 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-216ENST00000534765 PCDH15Q96QU1 1955 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 MANBAO00462 879 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 KHNYNO15037 678 aaKnown RBP8.46□□□□□ -1.05
SF3B2-216ENST00000534765 SEC22BO75396 215 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 MPC2O95563 127 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 MBP02144 154 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 HOXB8P17481 243 aaPredicted RBP8.46□□□□□ -1.05
SF3B2-216ENST00000534765 TNFRSF1BP20333 461 aa8.46□□□□□ -1.05
SF3B2-216ENST00000534765 CHMP24386 653 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms