RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 IFNEQ86WN2 208 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 MISPQ8IVT2 679 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 ABTB1Q969K4 478 aaPredicted RBP18.56■□□□□ 0.56
CCS-208ENST00000533244 WDYHV1Q96HA8 205 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 SIKE1Q9BRV8 207 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 TTYH2Q9BSA4 534 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 HOXD1Q9GZZ0 328 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 DKKL1Q9UK85 242 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 PCNX3Q9H6A9 2034 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 SCDO00767 359 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 RFXANKO14593 260 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 NDUFB5O43674 189 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 AGR2O95994 175 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 GUSBP08236 651 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 ZCCHC18P0CG32 403 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 CHMP24386 653 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 CHI3L1P36222 383 aaPredicted RBP18.55■□□□□ 0.56
CCS-208ENST00000533244 DCTP40126 519 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 NUP107P57740 925 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 RCAN2Q14206 197 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 TIGD2Q4W5G0 525 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 KLHL26Q53HC5 615 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.55■□□□□ 0.56
CCS-208ENST00000533244 B3GNT6Q6ZMB0 384 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 FUNDC1Q8IVP5 155 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 PM20D2Q8IYS1 436 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 RFWD2Q8NHY2 731 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 C1GALT1C1Q96EU7 318 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 ZNF350Q9GZX5 532 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 PTGES2Q9H7Z7 377 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 SLC6A13Q9NSD5 602 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 TMEM45AQ9NWC5 275 aa18.55■□□□□ 0.56
CCS-208ENST00000533244 AHRRA9YTQ3 701 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 GSNP06396 782 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 OR12D1P0DN82 309 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 GLI4P10075 376 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 CPN1P15169 458 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 GCKP35557 465 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 KHKP50053 298 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 ATP12AP54707 1039 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 CASP9P55211 416 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 TXNL4AP83876 142 aaKnown RBP18.54■□□□□ 0.56
CCS-208ENST00000533244 FUT5Q11128 374 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 CDSNQ15517 529 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 CD226Q15762 336 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 FLYWCH1Q4VC44 716 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 TNFAIP8L2Q6P589 184 aaPredicted RBP18.54■□□□□ 0.56
CCS-208ENST00000533244 ZNF621Q6ZSS3 439 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 VPS33AQ96AX1 596 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 THOC1Q96FV9 657 aaKnown RBP18.54■□□□□ 0.56
CCS-208ENST00000533244 NMUR2Q9GZQ4 415 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 CCDC134Q9H6E4 229 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 RMND5AQ9H871 391 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 NPHS2Q9NP85 383 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 SLC52A3Q9NQ40 469 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 EXD2Q9NVH0 621 aa18.54■□□□□ 0.56
CCS-208ENST00000533244 KLF2Q9Y5W3 355 aaPredicted RBP18.54■□□□□ 0.56
CCS-208ENST00000533244 NBPF19A0A087WUL8 3843 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 NPIPA5A0A0B4J1W7 369 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 NPIPA7E9PJI5 369 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 HMGN4O00479 90 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 NPIPA8P0DM63 369 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 HPGDP15428 266 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 MSX1P28360 303 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 MAGEA8P43361 318 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 TMEM44Q2T9K0 475 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 GLYR1Q49A26 553 aaPredicted RBP18.53■□□□□ 0.56
CCS-208ENST00000533244 ACSF3Q4G176 576 aaPredicted RBP18.53■□□□□ 0.56
CCS-208ENST00000533244 AAGABQ6PD74 315 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 BLOC1S3Q6QNY0 202 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 MTERF4Q7Z6M4 381 aaKnown RBP18.53■□□□□ 0.56
CCS-208ENST00000533244 RNF130Q86XS8 419 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 GATSQ8NAP1 163 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 ZNF527Q8NB42 609 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 ZFP90Q8TF47 636 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 RND1Q92730 232 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 GTF2H4Q92759 462 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 RAB8BQ92930 207 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 ITCHQ96J02 903 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 SFXN2Q96NB2 322 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 ZNF385DQ9H6B1 395 aa18.53■□□□□ 0.56
CCS-208ENST00000533244 ARHGAP21Q5T5U3 1957 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 PRAMEF27A3QJZ7 478 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 FCMRO60667 390 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 STX11O75558 287 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 HOXB9P17482 250 aaPredicted RBP18.52■□□□□ 0.56
CCS-208ENST00000533244 HK1P19367 917 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 LHX2P50458 406 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 MVDP53602 400 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 PMPCAQ10713 525 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 SQLEQ14534 574 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 ENPP6Q6UWR7 440 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 DNAJC14Q6Y2X3 702 aaPredicted RBP18.52■□□□□ 0.56
CCS-208ENST00000533244 SEM1Q6ZVN7 128 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 C16orf62Q7Z3J2 963 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 XAGE5Q8WWM1 108 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 SAP130Q9H0E3 1048 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 POLE3Q9NRF9 147 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 KCNE5Q9UJ90 142 aa18.52■□□□□ 0.56
CCS-208ENST00000533244 DCTN4Q9UJW0 460 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms