RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 OPRL1P41146 370 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 TAS2R50P59544 299 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 RPP38P78345 283 aaKnown RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ALDH6A1Q02252 535 aaKnown RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF33BQ06732 778 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF763Q0D2J5 394 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 DGCR6Q14129 220 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 RFX4Q33E94 735 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ADPRMQ3LIE5 342 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 SPIN4Q56A73 249 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ERICH5Q6P6B1 374 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 Q6ZNX1 250 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 LSRQ86X29 649 aaPredicted RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 SNX29P2Q8IUI4 249 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 LAS2Q8IYD9 372 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ENTHD1Q8IYW4 607 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 RAB42Q8N4Z0 105 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ABHD11Q8NFV4 315 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 OR2L3Q8NG85 312 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 NFKBIDQ8NI38 313 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 NDNFQ8TB73 568 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 C16orf78Q8WTQ4 265 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 SIGLEC11Q96RL6 698 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 SLC35A5Q9BS91 424 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 REEP4Q9H6H4 257 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 REEP1Q9H902 201 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 AMBNQ9NP70 447 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 SELENONQ9NZV5 590 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 TRPC4Q9UBN4 977 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 RPS6KA6Q9UK32 745 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ORC6Q9Y5N6 252 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 LYVE1Q9Y5Y7 322 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 PMF1-BGLAPU3KQ54 211 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF99A8MXY4 864 aaPredicted RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 WISP2O76076 250 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 MYO1DO94832 1006 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 LCKP06239 509 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 PSMB5P28074 263 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 PCGF2P35227 344 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ASMTP46597 345 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 VBP1P61758 197 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 RPS26P62854 115 aaKnown RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 CSNK1G2P78368 415 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 NPRL3Q12980 569 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 IL18R1Q13478 541 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 PDE7AQ13946 482 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 KEAP1Q14145 624 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF829Q3KNS6 432 aaPredicted RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 RNF130Q86XS8 419 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 CCDC103Q8IW40 242 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 SMYD1Q8NB12 490 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 MDS2Q8NDY4 140 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 OR9A1PQ8NGU1 263 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 SPPL2AQ8TCT8 520 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 UCN3Q969E3 161 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 RAD51AP1Q96B01 352 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 WDR34Q96EX3 536 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 PLEKHA8Q96JA3 519 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF354BQ96LW1 612 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 FEVQ99581 238 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 NIPSNAP1Q9BPW8 284 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ZFYVE21Q9BQ24 234 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 DOHHQ9BU89 302 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 YIPF2Q9BWQ6 316 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 BTBD2Q9BX70 525 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF717Q9BY31 904 aaPredicted RBP7.61□□□□□ -1.19
NEDD8-207ENST00000533242 ATP6V1HQ9UI12 483 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 BLOC1S6Q9UL45 172 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 PCDHGB1Q9Y5G3 927 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 HEATR5BQ9P2D3 2071 aa7.61□□□□□ -1.19
NEDD8-207ENST00000533242 OR2A25A4D2G3 310 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 FAM227AF5H4B4 570 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 PFDN1O60925 122 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 UGT2B11O75310 529 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 CLPXO76031 633 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 EIF2S1P05198 315 aaKnown RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 CYC1P08574 325 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 IL3P08700 152 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 ADRA2AP08913 450 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 C21orf33P30042 268 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-207ENST00000533242 HPCAL1P37235 193 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 NCS1P62166 190 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 SELENOWP63302 87 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 C2orf80Q0P641 193 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 GTF3C1Q12789 2109 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 DOC2BQ14184 412 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 FAM71E1Q6IPT2 247 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 H3F3CQ6NXT2 135 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 NXPE4Q6UWF7 544 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 AHSA2Q719I0 299 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 ANKRD13BQ86YJ7 626 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 SLC5A8Q8N695 610 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 AMER3Q8N944 861 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 C11orf65Q8NCR3 313 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF540Q8NDQ6 660 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 OR9Q2Q8NGE9 314 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 GIPC3Q8TF64 312 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 SLC5A11Q8WWX8 675 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 YIPF6Q96EC8 236 aa7.6□□□□□ -1.19
NEDD8-207ENST00000533242 SCMH1Q96GD3 660 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms