RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 C9orf40Q8IXQ3 194 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 CLECL1Q8IZS7 167 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 MIER2Q8N344 545 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 GALNT16Q8N428 558 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 ZNF843Q8N446 348 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 CPSF7Q8N684 471 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 ZNF441Q8N8Z8 693 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 EXD3Q8N9H8 876 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 CLEC1AQ8NC01 280 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 FDCSPQ8NFU4 85 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 BRIX1Q8TDN6 353 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 NTN5Q8WTR8 489 aaPredicted RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 RIT1Q92963 219 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 ERP27Q96DN0 273 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 RBM18Q96H35 190 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 THOC3Q96J01 351 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 BBS4Q96RK4 519 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 DUSP26Q9BV47 211 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 CNPPD1Q9BV87 410 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 OR8D2Q9GZM6 311 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 LHPPQ9H008 270 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 GIMAP4Q9NUV9 329 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 SH3BP4Q9P0V3 963 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 MAPRE3Q9UPY8 281 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 ERVK-19Q9WJR5 959 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 CLCA3PQ9Y6N3 262 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 A0A087WV62 115 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 TRBV11-1A0A0K0K1C0 115 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 FAM234BA2RU67 622 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 PYCARD-AS1I3L0S3 204 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 UPK1AO00322 258 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ZNF354AO60765 605 aaPredicted RBP8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ICAM2P13598 275 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 HOXB9P17482 250 aaPredicted RBP8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 TNNI3P19429 210 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 CAPN3P20807 821 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 CD40P25942 277 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ITGA3P26006 1051 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 APOBEC3AP31941 199 aaPredicted RBP8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 MPIP34949 423 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 GZMKP49863 264 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 EMDP50402 254 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 CLCN2P51788 898 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 POLE2P56282 527 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 RHDQ02161 417 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 EXOSC7Q15024 291 aaKnown RBP8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 B3GNTL1Q67FW5 361 aaPredicted RBP8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 IGFL2Q6UWQ7 119 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 TMEM107Q6UX40 140 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 PIGWQ7Z7B1 504 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 OR2L13Q8N349 312 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 NATD1Q8N6N6 113 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 OR7G1Q8NGA0 311 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 OR8K3Q8NH51 312 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 OR5P2Q8WZ92 322 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 KAT2AQ92830 837 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ELP4Q96EB1 424 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ZBED6CLQ96FA7 236 aaPredicted RBP8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ART5Q96L15 291 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 RILPQ96NA2 401 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ELAC2Q9BQ52 826 aaKnown RBP8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 FAM107BQ9H098 131 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 CXorf36Q9H7Y0 433 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ANKRA2Q9H9E1 313 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 AKIP1Q9NQ31 210 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 SERHLQ9NQF3 203 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 SAR1AQ9NR31 198 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ATAD3AQ9NVI7 634 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 TMEM45AQ9NWC5 275 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 GPR83Q9NYM4 423 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 ADAM21Q9UKJ8 722 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 C19orf53Q9UNZ5 99 aaPredicted RBP8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 DTX4Q9Y2E6 619 aa8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 PCDHGA9Q9Y5G4 932 aaKnown RBP8.06□□□□□ -1.12
CCDC90B-217ENST00000530253 MED13Q9UHV7 2174 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 A0A1W2PRB8 838 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 A6NL46 340 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 OR6C76A6NM76 312 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 K7EM74 188 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 NME6O75414 186 aaPredicted RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 NADKO95544 446 aaPredicted RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 C6orf47O95873 294 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 DDX5P17844 614 aaKnown RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 PTPN6P29350 595 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 CASRP41180 1078 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 MAP3K8P41279 467 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 CDKN2CP42773 168 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 CCL11P51671 97 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 POLR2JP52435 117 aaKnown RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 STX1BP61266 288 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 AP2B1P63010 937 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 HBA1P69905 142 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 HSPB3Q12988 150 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 GAB1Q13480 694 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 RAPSNQ13702 412 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 PGS1Q32NB8 556 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 FCRLBQ6BAA4 426 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 TMEM64Q6YI46 380 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 HSDL2Q6YN16 418 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms