RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 GFM2Q969S9 779 aaKnown RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 OMA1Q96E52 524 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 ZNF764Q96H86 408 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 TSSK3Q96PN8 268 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 BTBD9Q96Q07 612 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 NODALQ96S42 347 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 CCT8L2Q96SF2 557 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 PIP5K1AQ99755 562 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 CCT7Q99832 543 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 DOHHQ9BU89 302 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 STMN4Q9H169 189 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 UBQLN3Q9H347 655 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 CENPHQ9H3R5 247 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 REEP4Q9H6H4 257 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 ZNF703Q9H7S9 590 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 FOLH1BQ9HBA9 442 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 MIEF1Q9NQG6 463 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 QPCTLQ9NXS2 382 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 CRIM1Q9NZV1 1036 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 BOKQ9UMX3 212 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 C19orf53Q9UNZ5 99 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 TMED5Q9Y3A6 229 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 FREM3P0C091 2139 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 OR14I1A6ND48 311 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 CFAP73A6NFT4 308 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 NPIPA2E9PIF3 369 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 NPIPA3F8WFD2 350 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 AQP7O14520 342 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 AKAP10O43572 662 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 TLX2O43763 284 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-212ENST00000528930 SUSD5O60279 629 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 TSPAN2O60636 221 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 PEX11AO75192 247 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 ERN1O75460 977 aaKnown RBP7.69□□□□□ -1.18
SSBP3-212ENST00000528930 SKAP2O75563 359 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-212ENST00000528930 SLITRK5O94991 958 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 SNX4O95219 450 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 IGLV1-40P01703 118 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 SERPINE1P05121 402 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 IFI6P09912 130 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 BCKDHAP12694 445 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 ENDOUP21128 410 aaKnown RBP7.69□□□□□ -1.18
SSBP3-212ENST00000528930 MC3RP41968 323 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 KIR2DL3P43628 341 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 DEFA6Q01524 100 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 PLCXD2Q0VAA5 305 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 DAZAP2Q15038 168 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-212ENST00000528930 CHI3L2Q15782 390 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 FLYWCH1Q4VC44 716 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 C6orf136Q5SQH8 315 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 AGBL2Q5U5Z8 902 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 FBXW10Q5XX13 1052 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 TMEM107Q6UX40 140 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 ZNF551Q7Z340 670 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-212ENST00000528930 EGFL6Q8IUX8 553 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 OR2L13Q8N349 312 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 RPRMLQ8N4K4 120 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 ZNF781Q8N8C0 355 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 OR4N2Q8NGD1 307 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 CLHC1Q8NHS4 586 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 RNF138Q8WVD3 245 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 TMBIM1Q969X1 311 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 CIDECQ96AQ7 238 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-212ENST00000528930 ELP4Q96EB1 424 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 SLC35A4Q96G79 324 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 TMEM41AQ96HV5 264 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 PPP3R2Q96LZ3 170 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 JSRP1Q96MG2 331 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-212ENST00000528930 RILPQ96NA2 401 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 SORT1Q99523 831 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 ACKR4Q9NPB9 350 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 SPRR3Q9UBC9 169 aa7.69□□□□□ -1.18
SSBP3-212ENST00000528930 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 TRGV5A0A0B4J1U4 118 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 GMNCA6NCL1 334 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 OR6C70A6NIJ9 312 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 TMEM114B3SHH9 223 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 PDPK1O15530 556 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 HCN1O60741 890 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 ICOSLGO75144 302 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 REM1O75628 298 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 HPNP05981 417 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 BGNP21810 368 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 PTPN6P29350 595 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 NTSP30990 170 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 MAP3K8P41279 467 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 ASMTP46597 345 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 SLC1A6P48664 564 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 MAN2A2P49641 1150 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 PNLIPRP2P54317 469 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 ABCE1P61221 599 aaKnown RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 RPP38P78345 283 aaKnown RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 GAB1Q13480 694 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 PTGR1Q14914 329 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 PDCD2Q16342 344 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 IL23RQ5VWK5 629 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 TIGD3Q6B0B8 471 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 RTL6Q6ICC9 239 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 SLC30A6Q6NXT4 461 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 CCDC121Q6ZUS5 278 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms