RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 PCDHGA9Q9Y5G4 932 aaKnown RBP7.17□□□□□ -1.26
SORL1-207ENST00000528339 SH3PXD2BA1X283 911 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 J3QRE1 110 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 SOCS2O14508 198 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 ALDH9A1P49189 494 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 PRKCDQ05655 676 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 NSDHLQ15738 373 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 RPUSD3Q6P087 351 aaKnown RBP7.17□□□□□ -1.26
SORL1-207ENST00000528339 VRK2Q86Y07 508 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 SIAH3Q8IW03 269 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 GPR119Q8TDV5 335 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 DNAJC9Q8WXX5 260 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 THAP4Q8WY91 577 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 RAB8BQ92930 207 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 COL26A1Q96A83 441 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 SLC47A1Q96FL8 570 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 ZNF347Q96SE7 839 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 PIP5K1AQ99755 562 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 GPA33Q99795 319 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 RBCK1Q9BYM8 510 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 SLC19A3Q9BZV2 496 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 C19orf25Q9UFG5 118 aaPredicted RBP7.17□□□□□ -1.26
SORL1-207ENST00000528339 PCDHGB3Q9Y5G1 929 aa7.17□□□□□ -1.26
SORL1-207ENST00000528339 MRPS18BQ9Y676 258 aaKnown RBP7.17□□□□□ -1.26
SORL1-207ENST00000528339 EVPLLA8MZ36 301 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 ICOSLGO75144 302 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 NME6O75414 186 aaPredicted RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 SERPIND1P05546 499 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 UQCRC1P31930 480 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 ZNF117Q03924 483 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 TMEM201Q5SNT2 666 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 SNAP47Q5SQN1 464 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 TMPRSS11FQ6ZWK6 438 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 CYP4Z1Q86W10 505 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 EXD3Q8N9H8 876 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 ADPRHL1Q8NDY3 354 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 LRTOMTQ8WZ04 291 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 TFAP2CQ92754 450 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 NXPE2Q96DL1 559 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 COL21A1Q96P44 957 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 SLC29A1Q99808 456 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 CHID1Q9BWS9 393 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 JAM3Q9BX67 310 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 UGT2B28Q9BY64 529 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 OR2B2Q9GZK3 357 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 SLC35A3Q9Y2D2 325 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 RAI1Q7Z5J4 1906 aaPredicted RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 LOC102725191A0A1B0GVB3 256 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 SERINC4A6NH21 518 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 SNPHO15079 494 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 CLOCKO15516 846 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 UTS2O95399 124 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 HEXBP07686 556 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 FCGR1AP12314 374 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 ZNF17P17021 662 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 EVI2BP34910 448 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 FOLR3P41439 243 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 DAPP51397 102 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 GFRA1P56159 465 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 SRSF6Q13247 344 aaKnown RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 DCAF10Q5QP82 559 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 ZNF468Q5VIY5 522 aaPredicted RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 C12orf73Q69YU5 71 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 DNAJC14Q6Y2X3 702 aaPredicted RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 OLIG3Q7RTU3 272 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 RBM45Q8IUH3 476 aaKnown RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 SLC43A2Q8N370 569 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 RNF148Q8N7C7 305 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 OR2M3Q8NG83 312 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 CLIP3Q96DZ5 547 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 OMA1Q96E52 524 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 ECSITQ9BQ95 431 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 SLC25A19Q9HC21 320 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 PISDQ9UG56 409 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 NDRG4Q9ULP0 352 aaKnown RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 ANKUB1A6NFN9 424 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 SLC15A1P46059 708 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 HLCSP50747 726 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 ANXA11P50995 505 aaKnown RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 EFR3AQ14156 821 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 CTU2Q2VPK5 515 aaKnown RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 DESI1Q6ICB0 168 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 TNFAIP8L2Q6P589 184 aaPredicted RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 GALNT10Q86SR1 603 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 PNPT1Q8TCS8 783 aaKnown RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 SPACA9Q96E40 222 aaPredicted RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 NSMCE2Q96MF7 247 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 CRB3Q9BUF7 120 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 ANKRD60Q9BZ19 345 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 ZNF552Q9H707 407 aaPredicted RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 MEPEQ9NQ76 525 aaPredicted RBP7.16□□□□□ -1.26
SORL1-207ENST00000528339 UBQLN4Q9NRR5 601 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 NPFFR2Q9Y5X5 522 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 MPDZO75970 2070 aa7.16□□□□□ -1.26
SORL1-207ENST00000528339 HPNP05981 417 aa7.15□□□□□ -1.26
SORL1-207ENST00000528339 PRG2P13727 222 aa7.15□□□□□ -1.26
SORL1-207ENST00000528339 CASP3P42574 277 aa7.15□□□□□ -1.26
SORL1-207ENST00000528339 PTDSS1P48651 473 aaKnown RBP7.15□□□□□ -1.26
SORL1-207ENST00000528339 RPS18P62269 152 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms