RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CACNG1Q06432 222 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 SELPLGQ14242 412 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 OPCMLQ14982 345 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 PTGISQ16647 500 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 HIKESHIQ53FT3 197 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 WLSQ5T9L3 541 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 PRAMEF5Q5TYX0 476 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 ATF7IP2Q5U623 682 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 PRAMEF6Q5VXH4 476 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 BSPRYQ5W0U4 402 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 C8orf74Q6P047 294 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 CBLN3Q6UW01 205 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 CD164L2Q6UWJ8 174 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 Q6ZRP5 223 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 TRPM8Q7Z2W7 1104 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 PAQR7Q86WK9 346 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 STHQ8IWL8 128 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 ZNF485Q8NCK3 441 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 KIAA0895Q8NCT3 520 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 TRPV1Q8NER1 839 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 OR4A16Q8NH70 328 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 MAPK15Q8TD08 544 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 LKAAEAR1Q8TD35 194 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 PIK3R3Q92569 461 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 RPRD1AQ96P16 312 aaPredicted RBP4.96□□□□□ -1.62
PCF11-202ENST00000528336 C19orf43Q9BQ61 176 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 BPIFA3Q9BQP9 254 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 TMEM43Q9BTV4 400 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 TDRD1Q9BXT4 1180 aaKnown RBP4.96□□□□□ -1.62
PCF11-202ENST00000528336 NSRP1Q9H0G5 558 aaKnown RBP4.96□□□□□ -1.62
PCF11-202ENST00000528336 SPHK2Q9NRA0 654 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 RDH8Q9NYR8 311 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 NDUFA13Q9P0J0 144 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 FOXJ3Q9UPW0 622 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 C4AP0C0L4 1744 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 SCN7AQ01118 1682 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 CARMIL3Q8ND23 1372 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 IBTKQ9P2D0 1353 aaPredicted RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 A0A1B0GU03 582 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 ARHGEF35A5YM69 484 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 IQCF5A8MTL0 148 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 SUPT3HB4E1H0 165 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 PSMD11O00231 422 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 MBD3O95983 291 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 SERPINF2P08697 491 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 ZCCHC18P0CG32 403 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 ZNF44P15621 663 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 RPL35AP18077 110 aaKnown RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 SRMP19623 302 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 HNF1AP20823 631 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 PAICSP22234 425 aaKnown RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 UCP1P25874 307 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 XGP55808 180 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 RPP38P78345 283 aaKnown RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 MRPS15P82914 257 aaKnown RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 XIAPP98170 497 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 PPIL2Q13356 520 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 RFTN1Q14699 578 aaPredicted RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 NCF4Q15080 339 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 TATDN3Q17R31 274 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 HNRNPA1L2Q32P51 320 aaKnown RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 POM121L1PQ3SYA9 428 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 TTC23Q5W5X9 447 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 FBXL22Q6P050 247 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 APCDD1Q8J025 514 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 GLYATL2Q8WU03 294 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 COQ2Q96H96 371 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 RAB40CQ96S21 281 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 MCRIP2Q9BUT9 160 aaKnown RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 RIMS4Q9H426 269 aaPredicted RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 TREM1Q9NP99 234 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.95□□□□□ -1.62
PCF11-202ENST00000528336 RNF14Q9UBS8 474 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.95□□□□□ -1.62
PCF11-202ENST00000528336 RNF215Q9Y6U7 377 aa4.95□□□□□ -1.62
PCF11-202ENST00000528336 COL24A1Q17RW2 1714 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 LRP5O75197 1615 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 ADCY9O60503 1353 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 BCORQ6W2J9 1755 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 TRAV25A0A0B4J276 109 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 TRBV4-1A0A0J9YWV2 114 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 ERICH2A1L162 156 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 HEATR9A2RTY3 570 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 OR6C65A6NJZ3 312 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 OR2AG2A6NM03 316 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 H7C423 109 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 PDXKO00764 312 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 LCMT2O60294 686 aaKnown RBP4.94□□□□□ -1.62
PCF11-202ENST00000528336 SORBS2O94875 1100 aaKnown RBP4.94□□□□□ -1.62
PCF11-202ENST00000528336 BAG3O95817 575 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 TBX6O95947 436 aaPredicted RBP4.94□□□□□ -1.62
PCF11-202ENST00000528336 MSR1P21757 451 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 MARCKSP29966 332 aaPredicted RBP4.94□□□□□ -1.62
PCF11-202ENST00000528336 RORAP35398 523 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 DLSTP36957 453 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 BLVRAP53004 296 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 TPM4P67936 248 aa4.94□□□□□ -1.62
PCF11-202ENST00000528336 MSLNQ13421 630 aaPredicted RBP4.94□□□□□ -1.62
PCF11-202ENST00000528336 TMEM132DQ14C87 1099 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms