RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SHC1P29353 583 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 SRP9P49458 86 aaKnown RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 ST8SIA6P61647 398 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF658BQ4V348 819 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 AADACL4Q5VUY2 407 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 OR4C11Q6IEV9 310 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF322Q6U7Q0 402 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 PLEKHM3Q6ZWE6 761 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 TRILQ7L0X0 811 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 NKAIN4Q8IVV8 208 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 DCUN1D3Q8IWE4 304 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 GHDCQ8N2G8 530 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 FRMD1Q8N878 549 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF485Q8NCK3 441 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 OR2L2Q8NH16 312 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 ACOT12Q8WYK0 555 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 FAIM2Q9BWQ8 316 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 PINK1Q9BXM7 581 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 NT5DC2Q9H857 520 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 LHX9Q9NQ69 397 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 KLHL1Q9NR64 748 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 FBXO9Q9UK97 447 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 GPR55Q9Y2T6 319 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 A0A0G2JPF8 293 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 HNRNPCL2B2RXH8 293 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 HNRNPCL3B7ZW38 293 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 CHP2O43745 196 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 RGS9O75916 674 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 HNRNPCL4P0DMR1 293 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 SLC6A1P30531 599 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 ACSL1P33121 698 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 TAS2R38P59533 333 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 BTG1P62324 171 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 TGM3Q08188 693 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 DBPQ10586 325 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 ZBTB37Q5TC79 503 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 CDC73Q6P1J9 531 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 BHLHB9Q6PI77 547 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 ARL9Q6T311 187 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 NRMQ8IXM6 262 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF514Q96K75 400 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 MRGPRX3Q96LB0 322 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 DHRS9Q9BPW9 319 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 PIGUQ9H490 435 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 MTCH2Q9Y6C9 303 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 PLXND1Q9Y4D7 1925 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 LOC105369274A0A096LPK9 316 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 SYNDIG1LA6NDD5 238 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 SURF4O15260 269 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 RNF13O43567 381 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 LCMT2O60294 686 aaKnown RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 EIF4EP06730 217 aaKnown RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 AHRP35869 848 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 FRKP42685 505 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 PITPNBP48739 271 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 RGS8P57771 180 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-208ENST00000527323 KLHL12Q53G59 568 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 SMARCD3Q6STE5 483 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 TMEM107Q6UX40 140 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 AMZ2Q86W34 360 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 GPR135Q8IZ08 494 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 OR4N4Q8N0Y3 316 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 OR6C4Q8NGE1 309 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 OR5M3Q8NGP4 307 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 COQ10AQ96MF6 247 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 BCL2L10Q9HD36 194 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 KLHL28Q9NXS3 571 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 RASD1Q9Y272 281 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 CACNG2Q9Y698 323 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 TRPM6Q9BX84 2022 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 TSPAN11A1L157 253 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 CASC3O15234 703 aaKnown RBP11.67□□□□□ -0.54
CAPN1-208ENST00000527323 SLC22A5O76082 557 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 RIN1Q13671 783 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 RUNX3Q13761 415 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF234Q14588 700 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 GAB4Q2WGN9 574 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 FAM27D1Q5T7N8 215 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 PLBD1Q6P4A8 553 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 UBE3DQ7Z6J8 389 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 LRRC28Q86X40 367 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-208ENST00000527323 SDR16C5Q8N3Y7 309 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF655Q8N720 491 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-208ENST00000527323 OR52N1Q8NH53 320 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 LRRC20Q8TCA0 184 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 PCNPQ8WW12 178 aaKnown RBP11.67□□□□□ -0.54
CAPN1-208ENST00000527323 ZFPM2Q8WW38 1151 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 CCDC120Q96HB5 630 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 SAMD8Q96LT4 415 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 RANBP3Q9H6Z4 567 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-208ENST00000527323 PELI2Q9HAT8 420 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 CYSLTR2Q9NS75 346 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 C17orf113A0A1B0GUU1 675 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 ZC3H12DA2A288 527 aaKnown RBP11.67□□□□□ -0.54
CAPN1-208ENST00000527323 I3L521 148 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 PGRMC2O15173 223 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 C6P13671 934 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 HTR1FP30939 366 aa11.67□□□□□ -0.54
CAPN1-208ENST00000527323 MAT2AP31153 395 aaKnown RBP11.67□□□□□ -0.54
CAPN1-208ENST00000527323 TRHRP34981 398 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms