RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 PPIGQ13427 754 aaKnown RBP eCLIP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 CCNIQ14094 377 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 SURF2Q15527 256 aaPredicted RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 FAM98CQ17RN3 349 aaKnown RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 GTDC1Q4AE62 458 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 CST9Q5W186 159 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 TMEM71Q6P5X7 295 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 TAS1R1Q7RTX1 841 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 METTL13Q8N6R0 699 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 OR8J3Q8NGG0 315 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 SIGMAR1Q99720 223 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 NAA11Q9BSU3 229 aaPredicted RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 COLEC11Q9BWP8 271 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 OR8D2Q9GZM6 311 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 ERVK13-1Q9NX77 482 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 KIAA0586Q9BVV6 1533 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 LGALS8O00214 317 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 CXCL11O14625 94 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 XPNPEP2O43895 674 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 GH1P01241 217 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 MMP7P09237 267 aaPredicted RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 PTPRAP18433 802 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 MGAT1P26572 445 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 RPA3P35244 121 aaPredicted RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 CEBPAP49715 358 aaPredicted RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 RHOAP61586 193 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 HERV-K104P63124 156 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 LSM11P83369 360 aaKnown RBP eCLIP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 CRHR2Q13324 411 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 PTGES3Q15185 160 aaKnown RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 GGNBP1Q5YKI7 109 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 OR52W1Q6IF63 320 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 OR10K2Q6IF99 312 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 CHADLQ6NUI6 762 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 GSG1LQ6UXU4 331 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 LRRC57Q8N9N7 239 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 FBXO36Q8NEA4 188 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 CD200R1Q8TD46 325 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 HAS1Q92839 578 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 PLEKHF1Q96S99 279 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 BARHL1Q9BZE3 327 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 SOX17Q9H6I2 414 aaPredicted RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 FAM212BQ9NTI7 297 aaPredicted RBP6.54□□□□□ -1.36
LIN7C-202ENST00000524596 LGALS13Q9UHV8 139 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 CMAHPQ9Y471 501 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 PCDHB14Q9Y5E9 798 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 USP31Q70CQ4 1352 aa6.54□□□□□ -1.36
LIN7C-202ENST00000524596 A0A0G2JN53 185 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 FFAR3O14843 346 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 ARPC1BO15143 372 aaKnown RBP6.53□□□□□ -1.36
LIN7C-202ENST00000524596 SLC16A5O15375 505 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 GPR42O15529 346 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 CA12O43570 354 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 CSF3P09919 207 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 FABP4P15090 132 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 ZNF30P17039 623 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 MMP15P51511 669 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 RPL24P83731 157 aaKnown RBP6.53□□□□□ -1.36
LIN7C-202ENST00000524596 CDK5Q00535 292 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 AIMP2Q13155 320 aaKnown RBP6.53□□□□□ -1.36
LIN7C-202ENST00000524596 UBE2SQ16763 222 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 LTC4SQ16873 150 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 RBMS3Q6XE24 437 aaKnown RBP6.53□□□□□ -1.36
LIN7C-202ENST00000524596 HACD2Q6Y1H2 254 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 C6orf120Q7Z4R8 191 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 SLC39A11Q8N1S5 342 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 MS4A15Q8N5U1 240 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 PLPP5Q8NEB5 264 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 OR56B1Q8NGI3 324 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 OR2T34Q8NGX1 318 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 OR2T3Q8NH03 318 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 PHOSPHO2Q8TCD6 241 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 OSTF1Q92882 214 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 AMDHD1Q96NU7 426 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 UBL7Q96S82 380 aaPredicted RBP6.53□□□□□ -1.36
LIN7C-202ENST00000524596 LHPPQ9H008 270 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 FKRPQ9H9S5 495 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 CHST11Q9NPF2 352 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 KCNG2Q9UJ96 466 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 ASF1AQ9Y294 204 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 OR10H1Q9Y4A9 318 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 TSPOAP1O95153 1857 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 FAM230AA0A1W2PPH8 454 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 NKX6-3A6NJ46 265 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 UBE2CO00762 179 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 MEIS2O14770 477 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 CASKO14936 926 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 MFSD11O43934 449 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 DDNO94850 711 aaPredicted RBP6.53□□□□□ -1.36
LIN7C-202ENST00000524596 HIST1H2AGP0C0S8 130 aaPredicted RBP6.53□□□□□ -1.36
LIN7C-202ENST00000524596 T-ENOLP0DO92 83 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 TBPP20226 339 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 HIST1H2ADP20671 130 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 ELK3P41970 407 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 KIAA0895LQ68EN5 471 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 HIST2H2AA3Q6FI13 130 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 UBA3Q8TBC4 463 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 HMGB4Q8WW32 186 aa6.53□□□□□ -1.36
LIN7C-202ENST00000524596 DNASE2BQ8WZ79 361 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms