RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 SKP1P63208 163 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 POU6F2P78424 691 aaPredicted RBP12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 MGAT2Q10469 447 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 MAP4K2Q12851 820 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 MLLT11Q13015 90 aaPredicted RBP12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 MRGPREQ86SM8 312 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 C11orf74Q86VG3 221 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 MCATQ8IVS2 390 aaKnown RBP12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 GALNT12Q8IXK2 581 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 CACTIN-AS1Q8N1I8 211 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 OR8D4Q8NGM9 314 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 OR9Q1Q8NGQ5 310 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 CHAC2Q8WUX2 184 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 SLC30A2Q9BRI3 323 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 CNPPD1Q9BV87 410 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 SMURF1Q9HCE7 757 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 SACM1LQ9NTJ5 587 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 NDUFB11Q9NX14 153 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 CLEC2DQ9UHP7 191 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 SLC7A7Q9UM01 511 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 SLC9B1P1A6NJY1 282 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 SNPHO15079 494 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 CHST10O43529 356 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 PIP5K1CO60331 668 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 CT62P0C5K7 136 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 NID1P14543 1247 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 FOSL2P15408 326 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 GNSP15586 552 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 CRYBB2P43320 205 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZNF136P52737 540 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 EFNB1P98172 346 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 SELENBP1Q13228 472 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 KLHL22Q53GT1 634 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 GKN2Q86XP6 184 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 NRMQ8IXM6 262 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 SHISA5Q8N114 240 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 VWA5B2Q8N398 1253 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 OR52I1Q8NGK6 324 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 TMEM255BQ8WV15 326 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 PMM1Q92871 262 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 EFHD2Q96C19 240 aaPredicted RBP12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 KCNS3Q9BQ31 491 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 COL25A1Q9BXS0 654 aaPredicted RBP12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 TTYH1Q9H313 450 aaPredicted RBP12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 EXOSC4Q9NPD3 245 aaKnown RBP12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 POLE3Q9NRF9 147 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 NLGN3Q9NZ94 848 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 CA14Q9ULX7 337 aa12.8□□□□□ -0.36
LDLRAD3-202ENST00000524419 HYKKA2RU49 373 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 TRAPPC13A5PLN9 417 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZNF670-ZNF695F2Z2N8 137 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 CTDSP2O14595 271 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 PRODHO43272 600 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 APOA1P02647 267 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 THY1P04216 161 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 CD27P26842 260 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 GABRA3P34903 492 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 SOX3P41225 446 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 GPR4P46093 362 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 CAPZBP47756 277 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 RORCP51449 518 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 MAPK14Q16539 360 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 PRTGQ2VWP7 1150 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 MRPL2Q5T653 305 aaKnown RBP12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 ARHGEF39Q8N4T4 335 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 FGF11Q92914 225 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 CTHRC1Q96CG8 243 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 SSR3Q9UNL2 185 aa12.79□□□□□ -0.36
LDLRAD3-202ENST00000524419 GXYLT2A0PJZ3 443 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 PEX12O00623 359 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 KLF4O43474 513 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 CSF2P04141 144 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 PROS1P07225 676 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 CTSBP07858 339 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 HBQ1P09105 142 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 RNH1P13489 461 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 NME1P15531 152 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 SPNP16150 400 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 MYL12AP19105 171 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 CD38P28907 300 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 TNFSF8P32971 234 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 RPS19P39019 145 aaKnown RBP12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 MAP3K8P41279 467 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 TPTEP56180 551 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 COPZ1P61923 177 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 MINDY4Q4G0A6 757 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 C3orf38Q5JPI3 329 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 CLEC12AQ5QGZ9 265 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 DESI1Q6ICB0 168 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 FIGNL1Q6PIW4 674 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZNF620Q6ZNG0 422 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 GDPD3Q7L5L3 318 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 AKAP14Q86UN6 197 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 ARL14Q8N4G2 192 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 DEFB119Q8N690 84 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 OR52R1Q8NGF1 315 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 LMX1AQ8TE12 382 aa12.78□□□□□ -0.36
LDLRAD3-202ENST00000524419 RNFT2Q96EX2 444 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms