RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	TMPRSS12	Q86WS5	348 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAM129C	Q86XR2	697 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	PEX5L	Q8IYB4	626 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	ADGRF3	Q8IZF5	1079 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	MMP21	Q8N119	569 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC34A3	Q8N130	599 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	TCEANC	Q8N8B7	351 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	PLA2G15	Q8NCC3	412 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	MORN4	Q8NDC4	146 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR9Q1	Q8NGQ5	310 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMEM163	Q8TC26	289 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	JPH3	Q8WXH2	748 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	TM9SF4	Q92544	642 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	SCAMP4	Q969E2	229 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAM131C	Q96AQ9	280 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMEM159	Q96B96	161 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	MED8	Q96G25	268 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FYTTD1	Q96QD9	318 aa	Known RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZSCAN5A	Q9BUG6	496 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	KATNB1	Q9BVA0	655 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	MVB12B	Q9H7P6	319 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	PAQR5	Q9NXK6	330 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	RHCG	Q9UBD6	479 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FBXW2	Q9UKT8	454 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	KLHL20	Q9Y2M5	609 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	EXOSC1	Q9Y3B2	195 aa	Known RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZFYVE26	Q68DK2	2539 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033		A0A0X1KG70	313 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	TRDV1	A0A1B0GX56	115 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033		A0A1W2PQL4	384 aa	Predicted RBP	7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033		A0A1W2PQU0	124 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	PRAMEF27	A3QJZ7	478 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	CCDC182	A6NF36	153 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR2AG2	A6NM03	316 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	NOTO	A8MTQ0	251 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	SGK494	L7N484	410 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC31A1	O15431	190 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	RGS5	O15539	181 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	RNGTT	O60942	597 aa	Known RBP	7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF780A	O75290	641 aa	Predicted RBP	7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	SH3BGRL	O75368	114 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC43A1	O75387	559 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	SOX14	O95416	240 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	EPPIN	O95925	133 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	SOD1	P00441	154 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	PRNP	P04156	253 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	BCHE	P06276	602 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	CTSL	P07711	333 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ACP2	P11117	423 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ERG	P11308	486 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	DDC	P20711	480 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	MMP11	P24347	488 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	PDHA2	P29803	388 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	GABRA5	P31644	462 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	MMP12	P39900	470 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	RECQL	P46063	649 aa	Predicted RBP	7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	GSTM5	P46439	218 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	WNT4	P56705	351 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	TAS2R38	P59533	333 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	RUNX1T1	Q06455	604 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ACSM1	Q08AH1	577 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	COX10	Q12887	443 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	C1D	Q13901	141 aa	Known RBP	7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	MLC1	Q15049	377 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	QPRT	Q15274	297 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	GPR19	Q15760	415 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	MINDY4	Q4G0A6	757 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	CCDC58	Q4VC31	144 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	LRRC73	Q5JTD7	316 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	CCNJ	Q5T5M9	372 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	PIP5KL1	Q5T9C9	394 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	DDI2	Q5TDH0	399 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	LCN1P1	Q5VSP4	162 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	LIPK	Q5VXJ0	399 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	C1orf94	Q6P1W5	598 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	LCTL	Q6UWM7	567 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAM131A	Q6UXB0	335 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ANGPTL8	Q6UXH0	198 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033		Q6ZVL8	140 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	BCDIN3D	Q7Z5W3	292 aa	Known RBP	7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	KIF18B	Q86Y91	864 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	LINC00471	Q8N535	108 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ARIH2OS	Q8N7S6	290 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR4M1	Q8NGD0	313 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR9A1P	Q8NGU1	263 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC38A5	Q8WUX1	472 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC5A11	Q8WWX8	675 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	KLK6	Q92876	244 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	GLYATL1	Q969I3	302 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	TRIM63	Q969Q1	353 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	KLHDC7B	Q96G42	594 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF354B	Q96LW1	612 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	WFDC6	Q9BQY6	131 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF649	Q9BS31	505 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	TTYH2	Q9BSA4	534 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	RIOK2	Q9BVS4	552 aa	Known RBP	7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	JAM3	Q9BX67	310 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	HDAC8	Q9BY41	377 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	NLN	Q9BYT8	704 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	POLR2J3	Q9H1A7	115 aa	Known RBP	7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms