RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 DUSP5Q16690 384 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 C6orf183Q5T699 404 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 MZT2AQ6P582 158 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 ABI3BPQ7Z7G0 1075 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 ASPGQ86U10 573 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 LSRQ86X29 649 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 OR2L13Q8N349 312 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 OR51G2Q8NGK0 314 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 LILRB4Q8NHJ6 448 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 NT5CQ8TCD5 201 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 UBASH3BQ8TF42 649 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 OTULINQ96BN8 352 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 SCARF2Q96GP6 870 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 PRSS27Q9BQR3 290 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 PLA2G2FQ9BZM2 168 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 ISG20L2Q9H9L3 353 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 CACYBPQ9HB71 228 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 FGF22Q9HCT0 170 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 KRCC1Q9NPI7 259 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 RBFOX1Q9NWB1 397 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 KCMF1Q9P0J7 381 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 AGRPO00253 132 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 DVL2O14641 736 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 EML2O95834 649 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 GALP22466 123 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 DUSP8Q13202 625 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF776Q68DI1 518 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PLET1Q6UQ28 207 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 B3GLCTQ6Y288 498 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 NOXA1Q86UR1 476 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 GID4Q8IVV7 300 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 OR4N5Q8IXE1 308 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 SAMD14Q8IZD0 417 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 DUSP18Q8NEJ0 188 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 OR4K14Q8NGD5 310 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 BRIX1Q8TDN6 353 aaKnown RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 SDF2Q99470 211 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 TMEM43Q9BTV4 400 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 BEX2Q9BXY8 128 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 DPH1Q9BZG8 443 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 OR52D1Q9H346 318 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 SYNDIG1Q9H7V2 258 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PAQR5Q9NXK6 330 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D29Q9UFV1 150 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 KLF15Q9UIH9 416 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PHF11Q9UIL8 331 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 UNC119BA6NIH7 251 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 GTPBP1O00178 669 aaKnown RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 RNF13O43567 381 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PLRG1O43660 514 aaKnown RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 YES1P07947 543 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 THBS1P07996 1170 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 FAM157BP0CG42 384 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PRKAR1AP10644 381 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PSKH1P11801 424 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PRG2P13727 222 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 FUT1P19526 365 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 RNF144AP50876 292 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 FXYD6P3P58550 94 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 SIM1P81133 766 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 BDH1Q02338 343 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 GPR68Q15743 365 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 MAPK14Q16539 360 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 EIPR1Q53HC9 387 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 CCNJQ5T5M9 372 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 MZT2BQ6NZ67 158 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 FBXO42Q6P3S6 717 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 NIPAL3Q6P499 406 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PLBD1Q6P4A8 553 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 GLCCI1Q86VQ1 547 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 RANBP3LQ86VV4 465 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 ACBD7Q8N6N7 88 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 NLGN4YQ8NFZ3 816 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 ZFPM2Q8WW38 1151 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 HERVK_113Q902F9 699 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 ARMC5Q96C12 935 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 RIPOR3Q96MK2 946 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 KCNJ15Q99712 375 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 TIMP4Q99727 224 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 TMEM246Q9BRR3 403 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 MKRN2Q9H000 416 aaKnown RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 MED20Q9H944 212 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 SFXN1Q9H9B4 322 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PLSCR3Q9NRY6 295 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 PTGFRNQ9P2B2 879 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF223Q9UK11 482 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-228ENST00000524023 NOX1Q9Y5S8 564 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 DOCK8Q8NF50 2099 aa10.31□□□□□ -0.76
HDAC9-228ENST00000524023 DNAH14Q0VDD8 3507 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 PRSS38A1L453 326 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 ZC3H12DA2A288 527 aaKnown RBP10.3□□□□□ -0.76
HDAC9-228ENST00000524023 TRAPPC13A5PLN9 417 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 C12orf71A8MTZ7 269 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 LYRM1O43325 122 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SCO2O43819 266 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SLC19A2O60779 497 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 DNAJB6O75190 326 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 RGS9O75916 674 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SLC35G6P0C7Q6 338 aa10.3□□□□□ -0.76
HDAC9-228ENST00000524023 SMIM10L1P0DMW3 83 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms