RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 NEUROG1Q92886 237 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 ELP4Q96EB1 424 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 TMEM237Q96Q45 408 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 GRID1Q9ULK0 1009 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 A0A0J9YW62 118 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 TNFSF11O14788 317 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 CLOCKO15516 846 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 IGHV4-39P01824 125 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 TUBBP07437 444 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 RAC1P63000 192 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 SLC7A5Q01650 507 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 ZNF763Q0D2J5 394 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 FAM71E1Q6IPT2 247 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 ESPNLQ6ZVH7 1005 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 GABRG1Q8N1C3 465 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 OR2V1Q8NHB1 315 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 SMAP2Q8WU79 429 aaPredicted RBP20.26■□□□□ 0.83
PVT1-218ENST00000523328 GTPBP3Q969Y2 492 aaKnown RBP20.26■□□□□ 0.83
PVT1-218ENST00000523328 AMDHD1Q96NU7 426 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 TACO1Q9BSH4 297 aaKnown RBP20.26■□□□□ 0.83
PVT1-218ENST00000523328 YAE1D1Q9NRH1 226 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 LIPT1Q9Y234 373 aa20.26■□□□□ 0.83
PVT1-218ENST00000523328 ALPK2Q86TB3 2170 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 A0A087WZY1 265 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 C7orf72A4D263 438 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 TRIM49D1C9J1S8 452 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 ALG1L2C9J202 215 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 GABRA3P34903 492 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 TSC22D1Q15714 1073 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 TEX35Q5T0J7 233 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 ATG4DQ86TL0 474 aaPredicted RBP20.25■□□□□ 0.83
PVT1-218ENST00000523328 RELL1Q8IUW5 271 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 CDC26Q8NHZ8 85 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 PIK3R3Q92569 461 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 KCNA7Q96RP8 456 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 C3orf14Q9HBI5 128 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 FBXO34Q9NWN3 711 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 TIMM22Q9Y584 194 aa20.25■□□□□ 0.83
PVT1-218ENST00000523328 YLPM1P49750 1951 aaKnown RBP20.25■□□□□ 0.83
PVT1-218ENST00000523328 A0A1W2PRB8 838 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 SERTM1A2A2V5 107 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 DLX3O60479 287 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 ADAM11O75078 769 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 NDUFS7O75251 213 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 KCNH1O95259 989 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 CD3EP07766 207 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 NTSP30990 170 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 MAP3K8P41279 467 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 TAB1Q15750 504 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 PGGHGQ32M88 737 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 PLPPR5Q32ZL2 321 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 ZNF672Q499Z4 452 aaPredicted RBP20.24■□□□□ 0.83
PVT1-218ENST00000523328 CPTPQ5TA50 214 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 FIGNL1Q6PIW4 674 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 SEZ6L2Q6UXD5 910 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 TFAP2EQ6VUC0 442 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 DNAJC14Q6Y2X3 702 aaPredicted RBP20.24■□□□□ 0.83
PVT1-218ENST00000523328 OR4C3Q8NH37 302 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 DCAKDQ8WVC6 231 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 TMEM158Q8WZ71 300 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 HOXB13Q92826 284 aaPredicted RBP20.24■□□□□ 0.83
PVT1-218ENST00000523328 ZBTB8AQ96BR9 441 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 ZBED6CLQ96FA7 236 aaPredicted RBP20.24■□□□□ 0.83
PVT1-218ENST00000523328 RNF145Q96MT1 663 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 HDHD5Q9BXW7 423 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 TMEM185BQ9H7F4 350 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 MIEF1Q9NQG6 463 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 MED17Q9NVC6 651 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 PYCARDQ9ULZ3 195 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 NBEAL1Q6ZS30 2694 aa20.24■□□□□ 0.83
PVT1-218ENST00000523328 TTC36A6NLP5 189 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 NDUFB5O43674 189 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 OXSR1O95747 527 aaPredicted RBP20.23■□□□□ 0.83
PVT1-218ENST00000523328 ENO1P06733 434 aaKnown RBP20.23■□□□□ 0.83
PVT1-218ENST00000523328 IFI6P09912 130 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 SFRP5Q5T4F7 317 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 HBMQ6B0K9 141 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 EXOC3L1Q86VI1 746 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 POC1BQ8TC44 478 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 ROBO4Q8WZ75 1007 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 OSTF1Q92882 214 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 KLHDC3Q9BQ90 382 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 CDC42EP4Q9H3Q1 356 aaKnown RBP20.23■□□□□ 0.83
PVT1-218ENST00000523328 ESRP2Q9H6T0 727 aaKnown RBP20.23■□□□□ 0.83
PVT1-218ENST00000523328 MYNNQ9NPC7 610 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 TMEM216Q9P0N5 145 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 ZNF180Q9UJW8 692 aa20.23■□□□□ 0.83
PVT1-218ENST00000523328 A0A1W2PP18 115 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 NTN1O95631 604 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 NGFRP08138 427 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 TAC1P20366 129 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 IMPDH1P20839 514 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 ADH6P28332 368 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 SLC18A2Q05940 514 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 FAPQ12884 760 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 SLC29A2Q14542 456 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 CHRFAM7AQ494W8 412 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 GTF2IRD2BQ6EKJ0 949 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 ZNF572Q7Z3I7 529 aaPredicted RBP20.22■□□□□ 0.83
PVT1-218ENST00000523328 NUFIP2Q7Z417 695 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms