RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 KLRF1Q9NZS2 232 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 MSRB1Q9NZV6 116 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 FOXJ2Q9P0K8 574 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 IFNKQ9P0W0 207 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 FBXL4Q9UKA2 621 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 AMDHD2Q9Y303 409 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 PEX16Q9Y5Y5 336 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 AFF2P51816 1311 aa3.56□□□□□ -1.84
SKP1-209ENST00000522552 A0A0G2JNG1 304 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 IQANK1A0A1B0GTG1 560 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 KBTBD11-OT1A0A1B0GTJ5 212 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PRSS37A4D1T9 235 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 GAGE12JA6NER3 117 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SMCO2A6NFE2 343 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 C1QTNF3-AMACRE9PGA6 284 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 G3V4G9 280 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 FBP2O00757 339 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 CASKO14936 926 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SULT1B1O43704 296 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 AIREO43918 545 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ATP5HO75947 161 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ANXA9O76027 345 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SOX30O94993 753 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 LRATO95237 230 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 TMEM50AO95807 157 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 GSTA1P08263 222 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 FAM106CPP0CH98 169 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 HMGB2P26583 209 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 PSMB6P28072 239 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 EPHA2P29317 976 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 RPL13AP40429 203 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 BDKRB1P46663 353 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 HLCSP50747 726 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PSMD4P55036 377 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 BLOC1S1P78537 153 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 GUCY2DQ02846 1103 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 LGALS3BPQ08380 585 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 KLRB1Q12918 225 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ZNF234Q14588 700 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 KIR2DS5Q14953 304 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 VAMP3Q15836 100 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PSG3Q16557 428 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 C3AR1Q16581 482 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PPP1R3AQ16821 1122 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 MTX3Q5HYI7 312 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 EOGTQ5NDL2 527 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PAPD7Q5XG87 772 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 NEPROQ6NW34 567 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PNCKQ6P2M8 343 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SCYL2Q6P3W7 929 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 FAM173BQ6P4H8 233 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PAQR6Q6TCH4 344 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 TMIGD1Q6UXZ0 262 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ZNF793Q6ZN11 406 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 NIPA1Q7RTP0 329 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 LIMS2Q7Z4I7 341 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 HPS6Q86YV9 775 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 CDKL3Q8IVW4 592 aaPredicted RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 C17orf78Q8N4C9 275 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ZNF781Q8N8C0 355 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SYT8Q8NBV8 401 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 NEXN-AS1Q8NBZ9 246 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 DMBX1Q8NFW5 382 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 OR5M9Q8NGP3 310 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ZNF461Q8TAF7 563 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PIH1D2Q8WWB5 315 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 HAS1Q92839 578 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 CD101Q93033 1021 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 MRPL24Q96A35 216 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 C8orf44Q96CB5 159 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PDLIM2Q96JY6 352 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ZNF514Q96K75 400 aaPredicted RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 SLC30A2Q9BRI3 323 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 TUBGCP2Q9BSJ2 902 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 CNPY3Q9BT09 278 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SYT11Q9BT88 431 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 GPR174Q9BXC1 333 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SPZ1Q9BXG8 430 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ANGPTL4Q9BY76 406 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SHCBP1LQ9BZQ2 653 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 LAT2Q9GZY6 243 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 NXF5Q9H1B4 397 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 NKIRAS1Q9NYS0 192 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SIGLEC8Q9NYZ4 499 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 MYEF2Q9P2K5 600 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 CLN8Q9UBY8 286 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SCML1Q9UN30 329 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PRELID1Q9Y255 219 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 OR2W1Q9Y3N9 320 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 INSL6Q9Y581 213 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 TNFRSF18Q9Y5U5 241 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 KCNE1BA0A087WTH5 132 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ARHGEF33A8MVX0 844 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 P04436 131 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PNMA6AP0CW24 399 aaPredicted RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 ZNF43P17038 809 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 XRCC1P18887 633 aaPredicted RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 CA4P22748 312 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 DCKP27707 260 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms