RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SLC38A1Q9H2H9 487 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 SMURF1Q9HCE7 757 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 MRTO4Q9UKD2 239 aaKnown RBP9.48□□□□□ -0.89
MCF2-209ENST00000520602 CAB39Q9Y376 341 aaPredicted RBP9.48□□□□□ -0.89
MCF2-209ENST00000520602 MRPS2Q9Y399 296 aaKnown RBP9.48□□□□□ -0.89
MCF2-209ENST00000520602 MAP1BP46821 2468 aaKnown RBP9.48□□□□□ -0.89
MCF2-209ENST00000520602 C12orf71A8MTZ7 269 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 SCDO00767 359 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 PCMT1P22061 227 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 CD38P28907 300 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 ACVR1BP36896 505 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 TSFMP43897 325 aaKnown RBP9.48□□□□□ -0.89
MCF2-209ENST00000520602 OR1D4P47884 311 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 PPP1CAP62136 330 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 ZNF45Q02386 682 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 UBE2UQ5VVX9 321 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 SLC16A12Q6ZSM3 486 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 AKAP14Q86UN6 197 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 OR4C15Q8NGM1 316 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 NEIL3Q8TAT5 605 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 VOPP1Q96AW1 172 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 BPIFA2Q96DR5 249 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 ZNF582Q96NG8 517 aaPredicted RBP9.48□□□□□ -0.89
MCF2-209ENST00000520602 OR2A14Q96R47 310 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 SDF2Q99470 211 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 TBL1XR1Q9BZK7 514 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 LHX9Q9NQ69 397 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 A4GNTQ9UNA3 340 aa9.48□□□□□ -0.89
MCF2-209ENST00000520602 A0A1B0GVT2 93 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 GXYLT2A0PJZ3 443 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 ZNF217O75362 1048 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CCNKO75909 580 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 PPP1R3DO95685 299 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CSF2P04141 144 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 PYCR1P32322 319 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CRYBA2P53672 197 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 DUSP2Q05923 314 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 MRPL28Q13084 256 aaKnown RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 TUBA3EQ6PEY2 450 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 FRRS1Q6ZNA5 592 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 SHISA6Q6ZSJ9 500 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 PRR22Q8IZ63 422 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 TMEM163Q8TC26 289 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 THAP3Q8WTV1 239 aaPredicted RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 EFHD2Q96C19 240 aaPredicted RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 ZDHHC12Q96GR4 267 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 HS6ST2Q96MM7 605 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 GABRG3Q99928 467 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 KCNN2Q9H2S1 579 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 PIGUQ9H490 435 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 PLCXD1Q9NUJ7 323 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 COPS7AQ9UBW8 275 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 TMEM5Q9Y2B1 443 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 GPR55Q9Y2T6 319 aaPredicted RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 SCN2AQ99250 2005 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 C2orf92A0A1B0GVN3 265 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 FAM240BA0A1B0GVZ2 78 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 TRIM64CA6NLI5 447 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CPNE3O75131 537 aaKnown RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 NTN1O95631 604 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 HNRNPKP61978 463 aaKnown RBP eCLIP9.47□□□□□ -0.89
MCF2-209ENST00000520602 SYT14P1Q58G82 188 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 NKAIN2Q5VXU1 208 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 LAIR1Q6GTX8 287 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CHRDL2Q6WN34 429 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 DRAXINQ8NBI3 349 aaPredicted RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 PROKR2Q8NFJ6 384 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 OR52E2Q8NGJ4 325 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CAPSLQ8WWF8 208 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 YIPF6Q96EC8 236 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 ZNF717Q9BY31 904 aaPredicted RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 ATP13A2Q9NQ11 1180 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 HS3ST3A1Q9Y663 406 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 MKI67P46013 3256 aaKnown RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 HYKKA2RU49 373 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 AGAP5A6NIR3 686 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 SLITRK5O94991 958 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 RPP14O95059 124 aaKnown RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 HK1P19367 917 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 TEAD1P28347 426 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 PEBP1P30086 187 aaKnown RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 SLC6A6P31641 620 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CAV3P56539 151 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 PON3Q15166 354 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 LAIR2Q6ISS4 152 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 PLET1Q6UQ28 207 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 C19orf47Q8N9M1 422 aaKnown RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 OR13C2Q8NGS9 318 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 POLDIP3Q9BY77 421 aaKnown RBP9.47□□□□□ -0.89
MCF2-209ENST00000520602 TRIM2Q9C040 744 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CHST8Q9H2A9 424 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 BCL2L10Q9HD36 194 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CDH10Q9Y6N8 788 aa9.47□□□□□ -0.89
MCF2-209ENST00000520602 CDC14CA4D256 554 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 OR5K3A6NET4 321 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 PRAMEF25A6NGN4 478 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 SYT5O00445 386 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 HCRTR2O43614 444 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 CSO75390 466 aaKnown RBP9.46□□□□□ -0.89
MCF2-209ENST00000520602 AK1P00568 194 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms