RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SERPINB6P35237 376 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 FEN1P39748 380 aaKnown RBP2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC1A3P43003 542 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLCO1A2P46721 670 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 NUMBP49757 651 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 PRELPP51888 382 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 PLTPP55058 493 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 AQP4P55087 323 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 DR1Q01658 176 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ARHGAP1Q07960 439 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 MED21Q13503 144 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 GK3PQ14409 553 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC1A5Q15758 541 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM189A2Q15884 450 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 MAPK6Q16659 721 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 KCTD19Q17RG1 926 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 TYSND1Q2T9J0 566 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 EPC2Q52LR7 807 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 CEP55Q53EZ4 464 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 BOLA3Q53S33 107 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SPANXN4Q5MJ08 99 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 C1orf220Q5T0J3 134 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 CCNJQ5T5M9 372 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 C6orf183Q5T699 404 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 AGAP7PQ5VUJ5 663 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 LINC00696Q6ZRV3 163 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 C5orf24Q7Z6I8 188 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 GTSCR1Q86UQ5 136 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC51BQ86UW2 128 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 MYPOPQ86VE0 399 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 LRRC6Q86X45 466 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 CARM1Q86X55 608 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM71AQ8IYT1 594 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC38A6Q8IZM9 456 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 Q8NBF4 154 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 LILRB4Q8NHJ6 448 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 RPLP0P6Q8NHW5 317 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 DDI1Q8WTU0 396 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 BORCS5Q969J3 196 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SNF8Q96H20 258 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 PLEKHA8Q96JA3 519 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 TTC25Q96NG3 672 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ACCSQ96QU6 501 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 AGPAT1Q99943 283 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ARMC7Q9H6L4 198 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 LRRC19Q9H756 370 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 PARVGQ9HBI0 331 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 AGPAT3Q9NRZ7 376 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 DNAJC17Q9NVM6 304 aaKnown RBP2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 NINJ2Q9NZG7 142 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SEPT10Q9P0V9 454 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 KLK11Q9UBX7 282 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZMAT5Q9UDW3 170 aaKnown RBP2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 FETUBQ9UGM5 382 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 MUTYHQ9UIF7 546 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 GNPTGQ9UJJ9 305 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 DNAJC12Q9UKB3 198 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 RAB26Q9ULW5 256 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ERGIC3Q9Y282 383 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SNX24Q9Y343 169 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 MRPL11Q9Y3B7 192 aaKnown RBP2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ALG6Q9Y672 507 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZHX2Q9Y6X8 837 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 LTBP1Q14766 1721 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 THSD7AQ9UPZ6 1657 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 SBF2Q86WG5 1849 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 IGSF9BQ9UPX0 1349 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 IGHV3-20A0A0C4DH32 117 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM170AA1A519 330 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANKDD1BA6NHY2 528 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 CENPBD1B2RD01 187 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF732B4DXR9 585 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SPECC1L-ADORA2AF8WAN1 911 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 H3BNH8 94 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC33A1O00400 549 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RTCAO00442 366 aaKnown RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 HAT1O14929 419 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 PFDN6O15212 129 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ACOX3O15254 700 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 TNFSF12O43508 249 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM189A1O60320 539 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 LY75O60449 1722 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ACSL4O60488 711 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 STAM2O75886 525 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC16A8O95907 504 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 C1QAP02745 245 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 UGT2B4P06133 528 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 CTRB1P17538 263 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 AOC1P19801 751 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ITIH1P19827 911 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 DCKP27707 260 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ATP5DP30049 168 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 NMT1P30419 496 aaKnown RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 HMOX2P30519 316 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 PKLRP30613 574 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 CA8P35219 290 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RCVRNP35243 200 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 EPS15P42566 896 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC1A1P43005 524 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 CASP4P49662 377 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms