RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ENPP6Q6UWR7 440 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 ARSKQ6UWY0 536 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 GALNT10Q86SR1 603 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 C10orf67Q8IYJ2 551 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 CDRT4Q8N9R6 151 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 C9orf106Q8NAJ2 232 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 FNDC5Q8NAU1 212 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 ZFP28Q8NHY6 868 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 PPP1R14CQ8TAE6 165 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 FAM120BQ96EK7 910 aaKnown RBP8.46□□□□□ -1.06
HDAC3-215ENST00000519474 RMND5BQ96G75 393 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-215ENST00000519474 FAM107BQ9H098 131 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 CENPHQ9H3R5 247 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 CXorf36Q9H7Y0 433 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 MCCC2Q9HCC0 563 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 PNPOQ9NVS9 261 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 FAM120CQ9NX05 1096 aaKnown RBP8.46□□□□□ -1.06
HDAC3-215ENST00000519474 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-215ENST00000519474 PPP4R1LQ9P1A2 415 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 HAO1Q9UJM8 370 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 ABCG2Q9UNQ0 655 aa8.46□□□□□ -1.06
HDAC3-215ENST00000519474 RPH3AQ9Y2J0 694 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-215ENST00000519474 INTS1Q8N201 2190 aaKnown RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 IGLV3-32A0A0A0MS00 114 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 ALG1L2C9J202 215 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 SCN2BO60939 215 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 ZWINTO95229 277 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 OXSR1O95747 527 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 ANGPTL1O95841 491 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 C6orf47O95873 294 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 HMGN2P05204 90 aaKnown RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 ALOX5P09917 674 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 MYZAPP0CAP1 466 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 ZNF708P17019 499 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 HK1P19367 917 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 CAPN3P20807 821 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 BMP5P22003 454 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 TCEA1P23193 301 aaKnown RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 RPL3P39023 403 aaKnown RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 PRIM2P49643 509 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 CLK3P49761 638 aaKnown RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 PSMD4P55036 377 aaKnown RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 C21orf58P58505 322 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 TMEM44Q2T9K0 475 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 TMEM95Q3KNT9 176 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 LSM12Q3MHD2 195 aaKnown RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 GLYR1Q49A26 553 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 VPS26BQ4G0F5 336 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 BEND6Q5SZJ8 279 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 CCNJQ5T5M9 372 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 AAGABQ6PD74 315 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 CROCCP2Q86T23 111 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 IFNEQ86WN2 208 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 NATD1Q8N6N6 113 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 OR4K17Q8NGC6 315 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 OR5M1Q8NGP8 315 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 FAM81AQ8TBF8 368 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 WNT2BQ93097 391 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 OTUB1Q96FW1 271 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 PPP1R36Q96LQ0 422 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 PRPF18Q99633 342 aaKnown RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 SH3GL2Q99962 352 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 KLHDC3Q9BQ90 382 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 DUSP26Q9BV47 211 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 MMADHCQ9H3L0 296 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 PIGUQ9H490 435 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 GPATCH2Q9NW75 528 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 ZNF446Q9NWS9 450 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 GIN1Q9NXP7 522 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 ASIC5Q9NY37 505 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 JKAMPQ9P055 326 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 CLCF1Q9UBD9 225 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 EIF3LQ9Y262 564 aaKnown RBP8.45□□□□□ -1.06
HDAC3-215ENST00000519474 L3MBTL1Q9Y468 752 aa8.45□□□□□ -1.06
HDAC3-215ENST00000519474 OR2M5A3KFT3 312 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 FAM221AA4D161 298 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 CLCA1A8K7I4 914 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 H0YC42 278 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 DVL2O14641 736 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 ANKRD28O15084 1053 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 TGM6O95932 706 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 IL18BPO95998 194 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 NGFRP08138 427 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 PEPDP12955 493 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 DDX5P17844 614 aaKnown RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 BTF3P20290 206 aaKnown RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 GCKP35557 465 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 HPCAL1P37235 193 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 TPD52P55327 224 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 TUBA1BP68363 451 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 HBA1P69905 142 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 POU6F2P78424 691 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 BST1Q10588 318 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 STX5Q13190 355 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 MAD2L1Q13257 205 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 RCAN2Q14206 197 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 LASP1Q14847 261 aaKnown RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 PGS1Q32NB8 556 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 FBXL19-AS1Q494R0 122 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms