RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SHISA8B8ZZ34 492 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 RGS16O15492 202 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 SEC14L5O43304 696 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CTIFO43310 598 aaKnown RBP9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 NDUFB5O43674 189 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 ITM2AO43736 263 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 HSPA4LO95757 839 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 SERPINE1P05121 402 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 EPXP11678 715 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CD1EP15812 388 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CPA2P48052 419 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 PCYT1AP49585 367 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 ART1P52961 327 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 IST1P53990 364 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 POU6F2P78424 691 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 MAD2L1Q13257 205 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 LASP1Q14847 261 aaKnown RBP9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 GUSBP1Q15486 140 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CD226Q15762 336 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 SMU1Q2TAY7 513 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 TNFAIP8L3Q5GJ75 292 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CPTPQ5TA50 214 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CDC73Q6P1J9 531 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CHMP1BQ7LBR1 199 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 P4HA3Q7Z4N8 544 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CAMKMTQ7Z624 323 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CDC20BQ86Y33 519 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 NUDCD3Q8IVD9 361 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 MISPQ8IVT2 679 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 GTPBP8Q8N3Z3 284 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 KRTCAP2Q8N6L1 136 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 NATD1Q8N6N6 113 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 OR56A1Q8NGH5 318 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 LINC01560Q8TB33 94 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 SFXN5Q8TD22 340 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 NUDT8Q8WV74 236 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 OR5P2Q8WZ92 322 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 FIG4Q92562 907 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 JADE3Q92613 823 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CDS1Q92903 461 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 COQ8BQ96D53 544 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 STARD4Q96DR4 205 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 YIPF4Q9BSR8 244 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 BTBD2Q9BX70 525 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 PINK1Q9BXM7 581 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 PARD6BQ9BYG5 372 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 BHLHE41Q9C0J9 482 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CXXC4Q9H2H0 198 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 LIME1Q9H400 295 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 PIGUQ9H490 435 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 RNF122Q9H9V4 155 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 NEUROD4Q9HD90 331 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 UBQLN4Q9NRR5 601 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 GPATCH2Q9NW75 528 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 FBXO34Q9NWN3 711 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 ST6GALNAC2Q9UJ37 374 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 RAB21Q9UL25 225 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 CCDC168Q8NDH2 2452 aa9.42□□□□□ -0.9
HMGXB3-205ENST00000514469 NF1P21359 2839 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 TEP1Q99973 2627 aaKnown RBP9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 A8MXE2 369 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 MSTNO14793 375 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 TM9SF1O15321 606 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 BIRC5O15392 142 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 GMFGO60234 142 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 C6orf47O95873 294 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 DHRS4L1P0CG22 281 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 G6PDP11413 515 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 PRPS1L1P21108 318 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 PSMA4P25789 261 aaKnown RBP9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 CPOXP36551 454 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 KIR2DL2P43627 348 aaPredicted RBP9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 ABCE1P61221 599 aaKnown RBP9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 EMX2Q04743 252 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 TP53BP2Q13625 1128 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 PON3Q15166 354 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 CHI3L2Q15782 390 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 PLPPR5Q32ZL2 321 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 CCNJQ5T5M9 372 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 VWA1Q6PCB0 445 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 ZNF781Q8N8C0 355 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 GATSQ8NAP1 163 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 PPP1R14CQ8TAE6 165 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 FNDC9Q8TBE3 224 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 ACTRT2Q8TDY3 377 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 ZBTB8AQ96BR9 441 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 MOAP1Q96BY2 351 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 TUBGCP3Q96CW5 907 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 ZNF845Q96IR2 970 aaPredicted RBP9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 ADGRG7Q96K78 797 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 DACH2Q96NX9 599 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 NPAS1Q99742 590 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 FOXC2Q99958 501 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 DUSP26Q9BV47 211 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 ACTRT3Q9BYD9 372 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 MED17Q9NVC6 651 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 NOP53Q9NZM5 478 aaKnown RBP9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 EIF3LQ9Y262 564 aaKnown RBP9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 VDAC3Q9Y277 283 aa9.41□□□□□ -0.9
HMGXB3-205ENST00000514469 TESMINQ9Y4I5 508 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms