RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 SAMD14Q8IZD0 417 aaPredicted RBP18.05■□□□□ 0.48
SQSTM1-215ENST00000514093 C16orf78Q8WTQ4 265 aa18.05■□□□□ 0.48
SQSTM1-215ENST00000514093 RNF145Q96MT1 663 aa18.05■□□□□ 0.48
SQSTM1-215ENST00000514093 ERP44Q9BS26 406 aa18.05■□□□□ 0.48
SQSTM1-215ENST00000514093 MANSC1Q9H8J5 431 aa18.05■□□□□ 0.48
SQSTM1-215ENST00000514093 Q9N2J8 555 aa18.05■□□□□ 0.48
SQSTM1-215ENST00000514093 TMEM160Q9NX00 188 aa18.05■□□□□ 0.48
SQSTM1-215ENST00000514093 GXYLT2A0PJZ3 443 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 SHISA9B4DS77 424 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 OR4F21O95013 312 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 IGKV1D-16P01601 117 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 RAC1P63000 192 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 PRR5P85299 388 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 LOXL1Q08397 574 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 NRF1Q16656 503 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 TMEM201Q5SNT2 666 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 CYB5R2Q6BCY4 276 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 GTF2IRD2BQ6EKJ0 949 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 CLEC2AQ6UVW9 174 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 ESPNLQ6ZVH7 1005 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 GTF2IRD2Q86UP8 949 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 GTPBP8Q8N3Z3 284 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 BANPQ8N9N5 519 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 GATSQ8NAP1 163 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 KISS1RQ969F8 398 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 KLHDC3Q9BQ90 382 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 CACNG6Q9BXT2 260 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 EBPLQ9BY08 206 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 LPAR3Q9UBY5 353 aa18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 YLPM1P49750 1951 aaKnown RBP18.04■□□□□ 0.48
SQSTM1-215ENST00000514093 UPK1AO00322 258 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 UBFD1O14562 309 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 WIPF1O43516 503 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 SMIM24O75264 130 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 OTCP00480 354 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 RPS17P08708 135 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 PSMA4P25789 261 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 GABRA3P34903 492 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 NCBP2P52298 156 aaKnown RBP eCLIP18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 PLTPP55058 493 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 CDH11P55287 796 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 CARD18P57730 90 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 NAB1Q13506 487 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 HEPACAMQ14CZ8 416 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 STK11Q15831 433 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 ZNF525Q8N782 197 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 CDYL2Q8N8U2 506 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 ZNF483Q8TF39 744 aaPredicted RBP18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 APIPQ96GX9 242 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 GRIP2Q9C0E4 1043 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 FAIMQ9NVQ4 179 aa18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 MRTO4Q9UKD2 239 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 C19orf53Q9UNZ5 99 aaPredicted RBP18.03■□□□□ 0.48
SQSTM1-215ENST00000514093 A0A1W2PRB8 838 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 MYO1GB0I1T2 1018 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 MANBAO00462 879 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 RBP1P09455 135 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 IGHV4-31P0DP07 118 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 SRD5A1P18405 259 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 SHC1P29353 583 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 SFTPDP35247 375 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 SERPINB8P50452 374 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 FREM1Q5H8C1 2179 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 CPTPQ5TA50 214 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 BHLHA15Q7RTS1 189 aaPredicted RBP18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 EXOC3L1Q86VI1 746 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 CDC26Q8NHZ8 85 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 POC1BQ8TC44 478 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 PIK3R3Q92569 461 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 ADAD1Q96M93 576 aaKnown RBP18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 SRXN1Q9BYN0 137 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 POTEKPQ9BYX7 375 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 MED17Q9NVC6 651 aa18.02■□□□□ 0.48
SQSTM1-215ENST00000514093 A0A087WV62 115 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 A0A087WZY1 265 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ELOA3DA6NLF2 546 aaPredicted RBP18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ZNF814B7Z6K7 855 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ABCD4O14678 606 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 LMX1BO60663 402 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 LYZL6O75951 148 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 COL6A2P12110 1019 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 PAFAH1B1P43034 410 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 PSMD4P55036 377 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 BTKQ06187 659 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ITGADQ13349 1161 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 TRADDQ15628 312 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ZNHIT3Q15649 155 aaPredicted RBP18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ZNF239Q16600 458 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 PLPPR5Q32ZL2 321 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ELOA3BQ3SY89 546 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 PDSS1Q5T2R2 415 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 AGAP6Q5VW22 663 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 LILRA2Q8N149 483 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ELOA3Q8NG57 546 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 RNF128Q8TEB7 428 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ZBTB8AQ96BR9 441 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 SH3YL1Q96HL8 342 aaPredicted RBP18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 REXO5Q96IC2 774 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 KLHL15Q96M94 604 aa18.01■□□□□ 0.47
SQSTM1-215ENST00000514093 ACPTQ9BZG2 426 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms