RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CASP12Q6UXS9 341 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 MBOAT2Q6ZWT7 520 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 RRM2BQ7LG56 351 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 KIF18BQ86Y91 864 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 GRAMD2AQ8IUY3 354 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 C1orf210Q8IVY1 113 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 RCBTB1Q8NDN9 531 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 C7orf57Q8NEG2 295 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 OR8J1Q8NGP2 316 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 SLC25A19Q9HC21 320 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 FSCN3Q9NQT6 498 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 CNOT2Q9NZN8 540 aaKnown RBP13.84□□□□□ -0.19
VCAN-211ENST00000513984 PRODH2Q9UF12 536 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 SLC7A7Q9UM01 511 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 HEATR5AQ86XA9 2040 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 A0A1B0GX78 115 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 C17orf105B2RV13 164 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 NPIPB9F8W1W9 429 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 KLF4O43474 513 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 SIGLEC6O43699 453 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 BCAS1O75363 584 aaPredicted RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 GKN3PP0CG01 181 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 FBLP22087 321 aaKnown RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 FPR3P25089 353 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 ROR2Q01974 943 aaKnown RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 ZNF141Q15928 474 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 PERM1Q5SV97 790 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 PDZK1Q5T2W1 519 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 UBE2UQ5VVX9 321 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 ZNF574Q6ZN55 896 aaPredicted RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 CCDC81Q6ZN84 652 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 RASSF6Q6ZTQ3 369 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 TMPRSS9Q7Z410 1059 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 PTPMT1Q8WUK0 201 aaPredicted RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 TMEM255BQ8WV15 326 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 FCGR1BQ92637 280 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 ZC3H10Q96K80 434 aaKnown RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 PRSS27Q9BQR3 290 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 G6PC3Q9BUM1 346 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 FUNDC2Q9BWH2 189 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 YIPF2Q9BWQ6 316 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 ITPAQ9BY32 194 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 GPN2Q9H9Y4 310 aaPredicted RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 ZNF304Q9HCX3 659 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 AMBNQ9NP70 447 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 C14orf105Q9NVL8 296 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 EFCAB10A6NFE3 127 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 LYPD3O95274 346 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 NTN1O95631 604 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 PIPP12273 146 aaPredicted RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 HOXD12P35452 270 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 SLC15A1P46059 708 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 RFX3P48380 749 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 GIPRP48546 466 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 RHAGQ02094 409 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 OR1Q1Q15612 314 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 ZSWIM7Q19AV6 140 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 SLC16A12Q6ZSM3 486 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 MRGPREQ86SM8 312 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 ANKRD13BQ86YJ7 626 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 POGLUT1Q8NBL1 392 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 B3GNT7Q8NFL0 401 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 SLC35B4Q969S0 331 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 FAM46AQ96IP4 442 aaKnown RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 Q96MT0 163 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 POLDIP3Q9BY77 421 aaKnown RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 GPR83Q9NYM4 423 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 CNIH4Q9P003 139 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 WARS2Q9UGM6 360 aaKnown RBP13.83□□□□□ -0.2
VCAN-211ENST00000513984 ENPP5Q9UJA9 477 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 CBLCQ9ULV8 474 aa13.83□□□□□ -0.2
VCAN-211ENST00000513984 CPED1A4D0V7 1026 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 C21orf33P30042 268 aaPredicted RBP13.82□□□□□ -0.2
VCAN-211ENST00000513984 SMSP52788 366 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 PSMD4P55036 377 aaKnown RBP13.82□□□□□ -0.2
VCAN-211ENST00000513984 FGFBP1Q14512 234 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 GINS1Q14691 196 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 OCLNQ16625 522 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.82□□□□□ -0.2
VCAN-211ENST00000513984 SLC25A30Q5SVS4 291 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 ARHGAP22Q7Z5H3 698 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 NRMQ8IXM6 262 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 IQCF1Q8N6M8 205 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 TEX47Q8TBZ9 253 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 TSLPQ969D9 159 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 SENP5Q96HI0 755 aaPredicted RBP13.82□□□□□ -0.2
VCAN-211ENST00000513984 IL4I1Q96RQ9 567 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 BCL7BQ9BQE9 202 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 ZNF559Q9BR84 538 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 PLA2G12AQ9BZM1 189 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 GAREM1Q9H706 876 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 KRCC1Q9NPI7 259 aaPredicted RBP13.82□□□□□ -0.2
VCAN-211ENST00000513984 DNAJB12Q9NXW2 375 aaKnown RBP13.82□□□□□ -0.2
VCAN-211ENST00000513984 ATXN7L1Q9ULK2 861 aaPredicted RBP13.82□□□□□ -0.2
VCAN-211ENST00000513984 SRPK3Q9UPE1 567 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 ZDBF2Q9HCK1 2354 aa13.82□□□□□ -0.2
VCAN-211ENST00000513984 A0A1W2PQM1 296 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 TCRBV16S1A1N1A0A5B0 115 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 ENTPD6O75354 484 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 CFIP05156 583 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms