RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 DEFB127Q9H1M4 99 aa5.85□□□□□ -1.47
HMGN1P17-201ENST00000513734 CNOT10Q9H9A5 744 aaKnown RBP5.85□□□□□ -1.47
HMGN1P17-201ENST00000513734 COPS7BQ9H9Q2 264 aaPredicted RBP5.85□□□□□ -1.47
HMGN1P17-201ENST00000513734 CPSF2Q9P2I0 782 aaKnown RBP5.85□□□□□ -1.47
HMGN1P17-201ENST00000513734 OPTCQ9UBM4 332 aa5.85□□□□□ -1.47
HMGN1P17-201ENST00000513734 ENTPD4Q9Y227 616 aa5.85□□□□□ -1.47
HMGN1P17-201ENST00000513734 UTP11Q9Y3A2 253 aaKnown RBP5.85□□□□□ -1.47
HMGN1P17-201ENST00000513734 RNF11Q9Y3C5 154 aa5.85□□□□□ -1.47
HMGN1P17-201ENST00000513734 ATG4BQ9Y4P1 393 aa5.85□□□□□ -1.47
HMGN1P17-201ENST00000513734 ANKHD1Q8IWZ3 2542 aaKnown RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 A0A096LPK6 155 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 H0Y3Z8 333 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 H0YIZ8 118 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 K7EPI3 171 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 PPP6CO00743 305 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 OR7A17O14581 309 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 TFECO14948 347 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 HNRNPRO43390 633 aaKnown RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 KLK8O60259 260 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 CTNSO60931 367 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 SCELO95171 688 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 NADKO95544 446 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 ACSL3O95573 720 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 NPSP0C0P6 89 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 CCL3P10147 92 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 ABOP16442 354 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 TSPAN8P19075 237 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 HIST1H1TP22492 207 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 CPN2P22792 545 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 BSGP35613 385 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 SSR2P43308 183 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 DNASE1L1P49184 302 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 DIO1P49895 249 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 SSR4P51571 173 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 EEFSECP57772 596 aaKnown RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 KRTAP10-2P60368 255 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 IGLV3-21P80748 117 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 PSG6Q00889 435 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 FOLH1Q04609 750 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 SF3A3Q12874 501 aaKnown RBP eCLIP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 SLAMF1Q13291 335 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 ZNF630Q2M218 657 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 CDKL4Q5MAI5 379 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 KHDRBS2Q5VWX1 349 aaKnown RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 NIPAL1Q6NVV3 410 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 C8orf74Q6P047 294 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 MED27Q6P2C8 311 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 ANKRD16Q6P6B7 361 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 TMEM64Q6YI46 380 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 ZNF627Q7L945 461 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 TBC1D1Q86TI0 1168 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 MCEMP1Q8IX19 187 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 ZNF595Q8IYB9 648 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 GHDCQ8N2G8 530 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 TMEM156Q8N614 296 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 ZFP62Q8NB50 900 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 OR2M7Q8NG81 312 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 OR52B6Q8NGF0 335 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 OR6Y1Q8NGX8 325 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 STAG3L4Q8TBR4 150 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 MECRQ9BV79 373 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 RAB17Q9H0T7 212 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 CDC42EP4Q9H3Q1 356 aaKnown RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 CCDC134Q9H6E4 229 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 SAP30LQ9HAJ7 183 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 CLK4Q9HAZ1 481 aaKnown RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 NMRAL1Q9HBL8 299 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 LYRM4Q9HD34 91 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 NFU1Q9UMS0 254 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 C19orf53Q9UNZ5 99 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 ERVK-11Q9UQG0 969 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 MYRFQ9Y2G1 1151 aa5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 KLF13Q9Y2Y9 288 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P17-201ENST00000513734 PRRC2AP48634 2157 aaKnown RBP5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 C2CD3Q4AC94 2353 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 A0A087X1B8 175 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 A0A0A6YYD5 115 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 NKX2-6A6NCS4 301 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 FOXO6A8MYZ6 492 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 KDM4EB2RXH2 506 aaPredicted RBP5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 CLDN4O14493 209 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 PRRG2O14669 202 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 KRT38O76015 456 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 ZFAND5O76080 213 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 GLSO94925 669 aaPredicted RBP5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 AIFM1O95831 613 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 TUBB4AP04350 444 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 IGKV3-11P04433 115 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 TPOP07202 933 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 CT62P0C5K7 136 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 RFPL3SP0C7P2 107 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 GFAPP14136 432 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 FPR3P25089 353 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 GCAP28676 217 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 CRABP2P29373 138 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 THBS4P35443 961 aa5.83□□□□□ -1.48
HMGN1P17-201ENST00000513734 PIGAP37287 484 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms