RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 N4BP2L2Q92802 583 aaPredicted RBP5.46□□□□□ -1.54
USP53-206ENST00000510737 MAELQ96JY0 434 aaKnown RBP5.46□□□□□ -1.54
USP53-206ENST00000510737 LYSMD1Q96S90 227 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 PIP5K1AQ99755 562 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 SYT11Q9BT88 431 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 NUP85Q9BW27 656 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 SPATA16Q9BXB7 569 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 WWP1Q9H0M0 922 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 SRMSQ9H3Y6 488 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 PTTG2Q9NZH5 202 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 CHKBQ9Y259 395 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 ANKRD12Q6UB98 2062 aa5.46□□□□□ -1.54
USP53-206ENST00000510737 C1orf232A0A0U1RR37 186 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 A0A1B0GVL5 298 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 A0A1W2PQ72 361 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 C1orf226A1L170 272 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 LRRC53A6NM62 1247 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 USP27XA6NNY8 438 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 DNAJB6O75190 326 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 GATA1P15976 413 aaPredicted RBP5.45□□□□□ -1.54
USP53-206ENST00000510737 ERCC2P18074 760 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 GNAZP19086 355 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 HSPA9P38646 679 aaKnown RBP5.45□□□□□ -1.54
USP53-206ENST00000510737 RAB28P51157 221 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 DMTNQ08495 405 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 FASTKQ14296 549 aaKnown RBP5.45□□□□□ -1.54
USP53-206ENST00000510737 OR1C1Q15619 314 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 CA9Q16790 459 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 ANKRD20A8PQ5CZ79 823 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 TCTE1Q5JU00 501 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 NSUN5P2Q63ZY6 315 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 SLC25A25Q6KCM7 469 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 H3F3CQ6NXT2 135 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 FAAP20Q6NZ36 180 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 PAQR7Q86WK9 346 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 TRAPPC5Q8IUR0 188 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 PRSS58Q8IYP2 241 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 TRAM1L1Q8N609 369 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 RASGEF1AQ8N9B8 481 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 ROBO4Q8WZ75 1007 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 CCDC47Q96A33 483 aaKnown RBP5.45□□□□□ -1.54
USP53-206ENST00000510737 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 IMMP1LQ96LU5 166 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 C12orf66Q96MD2 445 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 NPAS2Q99743 824 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 ARPC5LQ9BPX5 153 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 TTYH2Q9BSA4 534 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 CRACR2AQ9BSW2 395 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 ZSCAN5AQ9BUG6 496 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 CHRNA10Q9GZZ6 450 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 PKD2L2Q9NZM6 624 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 OR14J1Q9UGF5 321 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 GNPTGQ9UJJ9 305 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 C3orf18Q9UK00 162 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 MKLN1Q9UL63 735 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 MAU2Q9Y6X3 613 aa5.45□□□□□ -1.54
USP53-206ENST00000510737 A0A1B0GX78 115 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 GTPBP10A4D1E9 387 aaKnown RBP5.44□□□□□ -1.54
USP53-206ENST00000510737 C2orf74A8MZ97 194 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 UQCRHP07919 91 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 FAM157CP0CG43 387 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 PFKFB1P16118 471 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 TPI1P60174 286 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 PTP4A2Q12974 167 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 GSTA3Q16772 222 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 SNAI3Q3KNW1 292 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 CHRFAM7AQ494W8 412 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 CMPK2Q5EBM0 449 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 ACER2Q5QJU3 275 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 GPRC6AQ5T6X5 926 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 RTL6Q6ICC9 239 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 ACAD10Q6JQN1 1059 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 WDR59Q6PJI9 974 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 CNSTQ6PJW8 725 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 TMEM220Q6QAJ8 160 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 FLVCR1-AS1Q8TAF5 88 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 LINC01560Q8TB33 94 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 LCN9Q8WX39 176 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 PERPQ96FX8 193 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 OR2A14Q96R47 310 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 OLFM1Q99784 485 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 TSG101Q99816 390 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 MCRIP2Q9BUT9 160 aaKnown RBP5.44□□□□□ -1.54
USP53-206ENST00000510737 TDRD1Q9BXT4 1180 aaKnown RBP5.44□□□□□ -1.54
USP53-206ENST00000510737 PDCL3Q9H2J4 239 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 XKR8Q9H6D3 395 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 LRTM1Q9HBL6 345 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 YAE1D1Q9NRH1 226 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 ATAD3AQ9NVI7 634 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 IRAK4Q9NWZ3 460 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 EURLQ9NYK6 297 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 HAO1Q9UJM8 370 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 NXT1Q9UKK6 140 aaKnown RBP5.44□□□□□ -1.54
USP53-206ENST00000510737 PLCL2Q9UPR0 1127 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 ALG6Q9Y672 507 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 COLEC10Q9Y6Z7 277 aa5.44□□□□□ -1.54
USP53-206ENST00000510737 EPPK1P58107 5090 aaKnown RBP5.44□□□□□ -1.54
USP53-206ENST00000510737 PRKDCP78527 4128 aaKnown RBP5.43□□□□□ -1.54
USP53-206ENST00000510737 LOC102723996A0A087X1L8 192 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 ANKRD66B4E2M5 251 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms