RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CPTPQ5TA50 214 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 C6orf163Q5TEZ5 329 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC22A10Q63ZE4 541 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 ATG16L1Q676U5 607 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 TIGD3Q6B0B8 471 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 OR5M10Q6IEU7 315 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 CDC73Q6P1J9 531 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC2A7Q6PXP3 512 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 C20orf204Q6ZNR8 217 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SZRD1Q7Z422 152 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 HMGN2P46Q86SG4 172 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 FJX1Q86VR8 437 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 DOLPP1Q86YN1 238 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 TAGAPQ8N103 731 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM26EQ8N5C1 309 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 HORMAD2Q8N7B1 307 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 GATSQ8NAP1 163 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 OR2M3Q8NG83 312 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 OR4C3Q8NH37 302 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 ITLN2Q8WWU7 325 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 RELTQ969Z4 430 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 TMEM125Q96AQ2 219 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 COL21A1Q96P44 957 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 GNRHR2Q96P88 292 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 OR7D2Q96RA2 312 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SECISBP2Q96T21 854 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 DOHHQ9BU89 302 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 DPY30Q9C005 99 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 OR2B2Q9GZK3 357 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 AGPAT4Q9NRZ5 378 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC25A37Q9NYZ2 338 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SLAMF8Q9P0V8 285 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 CBLCQ9ULV8 474 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC6A5Q9Y345 797 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 DIDO1Q9BTC0 2240 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 CENPEQ02224 2701 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 IGLV3-32A0A0A0MS00 114 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 A1L4Q6 167 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 H0YC42 278 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 KLRC4-KLRK1H3BQV0 150 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 C19orf84I3L1E1 186 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 AQP7O14520 342 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 LRRTM2O43300 516 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CDC40O60508 579 aaKnown RBP eCLIP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 DNAJA2O60884 412 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 UTS2O95399 124 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 OXSR1O95747 527 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CHRM4P08173 479 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 GABRA3P34903 492 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 RFX3P48380 749 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 MANFP55145 182 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 TPD52P55327 224 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CLDN15P56746 228 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 DCAF7P61962 342 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 PLGLB1Q02325 96 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 STX5Q13190 355 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 MAD2L1Q13257 205 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 RCAN2Q14206 197 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 MAPK14Q16539 360 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.54□□□□□ -1.368e-6■■■■■ 36.9
TOPBP1-207ENST00000509162 TMEM44Q2T9K0 475 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 PAGE3Q5JUK9 113 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 WIPI1Q5MNZ9 446 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 HLA-DQA1Q5Y7H0 255 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 HEPHL1Q6MZM0 1159 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 TNFAIP8L2Q6P589 184 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 LRFN4Q6PJG9 635 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 NUP54Q7Z3B4 507 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 R3HCC1LQ7Z5L2 792 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 SPATA19Q7Z5L4 167 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 YRDCQ86U90 279 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 MARCH3Q86UD3 253 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 COMTD1Q86VU5 262 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 DND1Q8IYX4 353 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 GHDCQ8N2G8 530 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 ANKFN1Q8N957 763 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CDRT4Q8N9R6 151 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 NAXEQ8NCW5 288 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 C7orf57Q8NEG2 295 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM83FQ8NEG4 500 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 OR4A15Q8NGL6 344 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 OR5M9Q8NGP3 310 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 OR5M1Q8NGP8 315 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 GOT1L1Q8NHS2 421 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 ZFP28Q8NHY6 868 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM57AQ8TBR7 257 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 POC1BQ8TC44 478 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 PNPT1Q8TCS8 783 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 STON2Q8WXE9 905 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC9A6Q92581 669 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 RAB8BQ92930 207 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC35G5Q96KT7 338 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 JSRP1Q96MG2 331 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 ZNF317Q96PQ6 595 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CCDC28BQ9BUN5 200 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 UGT2B28Q9BY64 529 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 TRIM8Q9BZR9 551 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 ZNF350Q9GZX5 532 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 PAIP1Q9H074 479 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms