RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 BRIX1Q8TDN6 353 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ST7LQ8TDW4 575 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SPSB2Q99619 263 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 HDHD5Q9BXW7 423 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CHST8Q9H2A9 424 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TNFRSF19Q9NS68 423 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 THUMPD1Q9NXG2 353 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 HAO2Q9NYQ3 351 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SSR3Q9UNL2 185 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF175Q9Y473 711 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CLDN16Q9Y5I7 305 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GREB1Q4ZG55 1949 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ANAPC1Q9H1A4 1944 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 A0A1W2PPH5 198 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PRSS47A8MTI9 375 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PIP5K1BO14986 540 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PRAMEF2O60811 474 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PAPSS2O95340 614 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 HPP00738 406 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PDYNP01213 254 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ZGLP1P0C6A0 271 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 LINC00032P0C843 101 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 UNGP13051 313 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MATN1P21941 496 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 FDXRP22570 491 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PTPN6P29350 595 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IDUAP35475 653 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MMP12P39900 470 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NR0B1P51843 470 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SOX8P57073 446 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PSPHP78330 225 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 IRF9Q00978 393 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PMPCAQ10713 525 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PMS2P3Q13401 168 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SERTAD2Q14140 314 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC70Q7Z2Q7 622 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GPR141Q7Z602 305 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PRELID2Q8N945 189 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM102Q8N9M5 508 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ZBTB44Q8NCP5 570 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR6S1Q8NH40 331 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ANGPTL6Q8NI99 470 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GRHL3Q8TE85 626 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 THEM6Q8WUY1 208 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 AP3S1Q92572 193 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 KHSRPQ92945 711 aaKnown RBP eCLIP2.77□□□□□ -1.976e-7■■■■■ 30.7
NEDD4-208ENST00000508342 FOXN4Q96NZ1 517 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 KCNJ15Q99712 375 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SLC30A2Q9BRI3 323 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 C9orf16Q9BUW7 83 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf50Q9BV19 199 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 POLDIP3Q9BY77 421 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR51B6Q9H340 312 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 EURLQ9NYK6 297 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DTLQ9NZJ0 730 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ERRFI1Q9UJM3 462 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 KCNS2Q9ULS6 477 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CORO1CQ9ULV4 474 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NOP16Q9Y3C1 178 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 AP4B1Q9Y6B7 739 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 G3V3Y1 287 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 EIF3FO00303 357 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SHOX2O60902 331 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 UGT2B11O75310 529 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NME6O75414 186 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MOSPD3O75425 235 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 BANF1O75531 89 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 KLKB1P03952 638 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MAPK3P27361 379 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SLC25A11Q02978 314 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ITIH4Q14624 930 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NADK2Q4G0N4 442 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 FAM209AQ5JX71 171 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ERICH5Q6P6B1 374 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 C16orf54Q6UWD8 224 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SSX6Q7RTT6 188 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GATSQ8NAP1 163 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CPEB3Q8NE35 698 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ZUFSPQ96AP4 578 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PYCR2Q96C36 320 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OMA1Q96E52 524 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 C1GALT1C1Q96EU7 318 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PGAP3Q96FM1 320 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ALOXE3Q9BYJ1 711 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ENKD1Q9H0I2 346 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf21Q9H246 121 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TFB2MQ9H5Q4 396 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NOL11Q9H8H0 719 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PELI2Q9HAT8 420 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SLC6A20Q9NP91 592 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CHRAC1Q9NRG0 131 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ARHGAP20Q9P2F6 1191 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PLEKHA6Q9Y2H5 1048 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OARD1Q9Y530 152 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ARID1AO14497 2285 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PKDREJQ9NTG1 2253 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TRAV17A0A0B4J275 112 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DNALI1O14645 258 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 GPR39O43194 453 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms