RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 NTN1O95631 604 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 EGR1P18146 543 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 AGTR1P30556 359 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 FAM180BQ6P0A1 224 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 SEZ6L2Q6UXD5 910 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 NPSR1Q6W5P4 371 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 GALNT10Q86SR1 603 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 GABRG1Q8N1C3 465 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 PLD6Q8N2A8 252 aaKnown RBP12.34□□□□□ -0.43
DDR1-260ENST00000507533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.34□□□□□ -0.43
DDR1-260ENST00000507533 OR4N2Q8NGD1 307 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 RHEBL1Q8TAI7 183 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 WDR20Q8TBZ3 569 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 MZB1Q8WU39 189 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 ATOH8Q96SQ7 321 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 HBEGFQ99075 208 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 ANKRA2Q9H9E1 313 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 PAQR5Q9NXK6 330 aaPredicted RBP12.34□□□□□ -0.43
DDR1-260ENST00000507533 TBK1Q9UHD2 729 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 PSME2Q9UL46 239 aa12.34□□□□□ -0.43
DDR1-260ENST00000507533 SYCE1LA8MT33 242 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 CXCL13O43927 109 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 FADS1O60427 444 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 GUCY1B2O75343 617 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 RBP1P09455 135 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 ITGA2P17301 1181 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 PIK3CGP48736 1102 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 MAPK12P53778 367 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 PSPHP78330 225 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 TSNAXIP1Q2TAA8 658 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 C11orf71Q6IPW1 123 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 PAGE2Q7Z2X7 111 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 SLC44A2Q8IWA5 706 aaPredicted RBP12.33□□□□□ -0.44
DDR1-260ENST00000507533 OR2W6PQ8NHA6 318 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 SGMS2Q8NHU3 365 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 ACMSDQ8TDX5 336 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
DDR1-260ENST00000507533 DUSP19Q8WTR2 217 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 KISS1RQ969F8 398 aaPredicted RBP12.33□□□□□ -0.44
DDR1-260ENST00000507533 KLHL29Q96CT2 875 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
DDR1-260ENST00000507533 VSTM2LQ96N03 204 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 USB1Q9BQ65 265 aaKnown RBP12.33□□□□□ -0.44
DDR1-260ENST00000507533 POTEKPQ9BYX7 375 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 RTN4RQ9BZR6 473 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 ROPN1BQ9BZX4 212 aaPredicted RBP12.33□□□□□ -0.44
DDR1-260ENST00000507533 ROPN1Q9HAT0 212 aaPredicted RBP12.33□□□□□ -0.44
DDR1-260ENST00000507533 CBLN4Q9NTU7 201 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 AHSPQ9NZD4 102 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 ADAM29Q9UKF5 820 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 RNF11Q9Y3C5 154 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 ZNF780BQ9Y6R6 833 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 ALPK2Q86TB3 2170 aa12.33□□□□□ -0.44
DDR1-260ENST00000507533 TLDC2A0PJX2 215 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 SMIM23A6NLE4 172 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 UGDHO60701 494 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 ADAP00813 363 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 OPN1LWP04000 364 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 MTHFD2P13995 350 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 TTKP33981 857 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 IFFO1Q0D2I5 559 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 TMEM44Q2T9K0 475 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 FAM174BQ3ZCQ3 159 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 ZNF628Q5EBL2 1059 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 TECRLQ5HYJ1 363 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 GTF2IRD2BQ6EKJ0 949 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 TFAP2EQ6VUC0 442 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 GTF2IRD2Q86UP8 949 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 WDR75Q8IWA0 830 aaKnown RBP12.32□□□□□ -0.44
DDR1-260ENST00000507533 RIBC1Q8N443 379 aaPredicted RBP12.32□□□□□ -0.44
DDR1-260ENST00000507533 ZMYND19Q96E35 227 aaPredicted RBP12.32□□□□□ -0.44
DDR1-260ENST00000507533 CNRIP1Q96F85 164 aaPredicted RBP12.32□□□□□ -0.44
DDR1-260ENST00000507533 ADGRG7Q96K78 797 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 ZNF681Q96N22 645 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 MRPL1Q9BYD6 325 aaKnown RBP12.32□□□□□ -0.44
DDR1-260ENST00000507533 FLRT3Q9NZU0 649 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 OR10H1Q9Y4A9 318 aa12.32□□□□□ -0.44
DDR1-260ENST00000507533 YLPM1P49750 1951 aaKnown RBP12.31□□□□□ -0.44
DDR1-260ENST00000507533 MGAM2Q2M2H8 2515 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 FREM1Q5H8C1 2179 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 A0A1W2PPM1 405 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 ABCD4O14678 606 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 GMFGO60234 142 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 ERLIN1O75477 346 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 CSF3P09919 207 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 ARL1P40616 181 aaPredicted RBP12.31□□□□□ -0.44
DDR1-260ENST00000507533 CLK3P49761 638 aaKnown RBP12.31□□□□□ -0.44
DDR1-260ENST00000507533 GGTLC2Q14390 218 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 P2RY6Q15077 328 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 TMEM201Q5SNT2 666 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 BHLHA15Q7RTS1 189 aaPredicted RBP12.31□□□□□ -0.44
DDR1-260ENST00000507533 NUFIP2Q7Z417 695 aaKnown RBP12.31□□□□□ -0.44
DDR1-260ENST00000507533 MARCH3Q86UD3 253 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 LCA5Q86VQ0 697 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 CCDC116Q8IYX3 515 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 DEPDC4Q8N2C3 294 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 BANPQ8N9N5 519 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 L3MBTL4Q8NA19 623 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 OR2V1Q8NHB1 315 aa12.31□□□□□ -0.44
DDR1-260ENST00000507533 ZNF675Q8TD23 568 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms