RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 SLC6A15Q9H2J7 730 aa18.08■□□□□ 0.48
SNX25-204ENST00000506896 RAD21L1Q9H4I0 556 aa18.08■□□□□ 0.48
SNX25-204ENST00000506896 TPT1P8Q9HAU6 139 aa18.08■□□□□ 0.48
SNX25-204ENST00000506896 SLC6A13Q9NSD5 602 aa18.08■□□□□ 0.48
SNX25-204ENST00000506896 THUMPD1Q9NXG2 353 aaKnown RBP18.08■□□□□ 0.48
SNX25-204ENST00000506896 H3BNH8 94 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 HMGN4O00479 90 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 TPOP07202 933 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 ENDOUP21128 410 aaKnown RBP18.07■□□□□ 0.48
SNX25-204ENST00000506896 DCTP40126 519 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 DSCR4P56555 118 aaPredicted RBP18.07■□□□□ 0.48
SNX25-204ENST00000506896 HPCAP84074 193 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 STX5Q13190 355 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 C3AR1Q16581 482 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 LRIF1Q5T3J3 769 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 AP1ARQ63HQ0 302 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 OR5M10Q6IEU7 315 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 MTERF4Q7Z6M4 381 aaKnown RBP18.07■□□□□ 0.48
SNX25-204ENST00000506896 FAM83FQ8NEG4 500 aaPredicted RBP18.07■□□□□ 0.48
SNX25-204ENST00000506896 OR2M3Q8NG83 312 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 RAB8BQ92930 207 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 RTN4RQ9BZR6 473 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 ZNF350Q9GZX5 532 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 NSRP1Q9H0G5 558 aaKnown RBP18.07■□□□□ 0.48
SNX25-204ENST00000506896 LEF1Q9UJU2 399 aaPredicted RBP18.07■□□□□ 0.48
SNX25-204ENST00000506896 TINAGQ9UJW2 476 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 FBXL2Q9UKC9 423 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 PCDHB14Q9Y5E9 798 aa18.07■□□□□ 0.48
SNX25-204ENST00000506896 CELSR2Q9HCU4 2923 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 NCKAP5O14513 1909 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 NPIPA2E9PIF3 369 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 NPIPB9F8W1W9 429 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 NPIPA3F8WFD2 350 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 CCL21O00585 134 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 ANGPT2O15123 496 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 ZNHIT1O43257 154 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 PPIBP23284 216 aaKnown RBP18.06■□□□□ 0.48
SNX25-204ENST00000506896 MSX1P28360 303 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 KLHL26Q53HC5 615 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 NHSL2Q5HYW2 709 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 WLSQ5T9L3 541 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 CD163Q86VB7 1156 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 DOLPP1Q86YN1 238 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 OR14L1PQ8NHC6 308 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 PNPT1Q8TCS8 783 aaKnown RBP18.06■□□□□ 0.48
SNX25-204ENST00000506896 ROPN1LQ96C74 230 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 TRNT1Q96Q11 434 aaKnown RBP18.06■□□□□ 0.48
SNX25-204ENST00000506896 TP63Q9H3D4 680 aaPredicted RBP18.06■□□□□ 0.48
SNX25-204ENST00000506896 DSN1Q9H410 356 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 TAS2R10Q9NYW0 307 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 SUCOQ9UBS9 1254 aaKnown RBP18.06■□□□□ 0.48
SNX25-204ENST00000506896 DKKL1Q9UK85 242 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 ACAD8Q9UKU7 415 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 NDUFAF1Q9Y375 327 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 WDR45Q9Y484 360 aa18.06■□□□□ 0.48
SNX25-204ENST00000506896 C15orf38-AP3S2A0A0A6YYH1 394 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 FIGNL2A6NMB9 653 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 CLIC1O00299 241 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 ACTL6AO96019 429 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 SNRPB2P08579 225 aaKnown RBP18.05■□□□□ 0.48
SNX25-204ENST00000506896 HOXB9P17482 250 aaPredicted RBP18.05■□□□□ 0.48
SNX25-204ENST00000506896 DPP4P27487 766 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 COL8A1P27658 744 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 ADSLP30566 484 aaPredicted RBP18.05■□□□□ 0.48
SNX25-204ENST00000506896 LSP1P33241 339 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 CRATP43155 626 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 MVDP53602 400 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 FADDQ13158 208 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 ZNF141Q15928 474 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 ZNF630Q2M218 657 aaPredicted RBP18.05■□□□□ 0.48
SNX25-204ENST00000506896 EIPR1Q53HC9 387 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 WIPI1Q5MNZ9 446 aaPredicted RBP18.05■□□□□ 0.48
SNX25-204ENST00000506896 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNX25-204ENST00000506896 IFNEQ86WN2 208 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 C10orf82Q8WW14 230 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 CCDC120Q96HB5 630 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 SAP130Q9H0E3 1048 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 SAR1AQ9NR31 198 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 MED11Q9P086 117 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 SPRR3Q9UBC9 169 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 SH3BGRL2Q9UJC5 107 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 DTNAQ9Y4J8 743 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 HRH3Q9Y5N1 445 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 GMEB1Q9Y692 573 aa18.05■□□□□ 0.48
SNX25-204ENST00000506896 CACNA1DQ01668 2161 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 E9PLN8 166 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 SLC22A2O15244 555 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 KIAA0513O60268 411 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 FCMRO60667 390 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 C1QCP02747 245 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 ESRRAP11474 423 aaPredicted RBP18.04■□□□□ 0.48
SNX25-204ENST00000506896 SF3A3Q12874 501 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNX25-204ENST00000506896 GPR68Q15743 365 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 GTDC1Q4AE62 458 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 GXYLT1Q4G148 440 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 GPAT3Q53EU6 434 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 PAGE3Q5JUK9 113 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 COX20Q5RI15 118 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 VASNQ6EMK4 673 aa18.04■□□□□ 0.48
SNX25-204ENST00000506896 AAGABQ6PD74 315 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms