RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ANGPTL8Q6UXH0 198 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 Q6ZPB1 254 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 CCDC80Q76M96 950 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 SNX32Q86XE0 403 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 SIAH3Q8IW03 269 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 FAM71CQ8NEG0 241 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 OR52E4Q8NGH9 312 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 CPT1CQ8TCG5 803 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 XAGE5Q8WWM1 108 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 TMEM234Q8WY98 164 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 ST8SIA1Q92185 356 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 CDS1Q92903 461 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 SARAFQ96BY9 339 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 REXO5Q96IC2 774 aaKnown RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 MAGED4Q96JG8 741 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 MARK4Q96L34 752 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 GPR137Q96N19 417 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 ECSITQ9BQ95 431 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 GPATCH1Q9BRR8 931 aaKnown RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 INPP5KQ9BT40 448 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 OR2B2Q9GZK3 357 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 LAT2Q9GZY6 243 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF703Q9H7S9 590 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 ZBTB20Q9HC78 741 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 SPAG4Q9NPE6 437 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 SLC25A37Q9NYZ2 338 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 PLA2G3Q9NZ20 509 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 VAPAQ9P0L0 249 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 ABCD2Q9UBJ2 740 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 C15orf41Q9Y2V0 281 aa7.74□□□□□ -1.17
PDGFC-205ENST00000506880 GPC6Q9Y625 555 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-205ENST00000506880 MYOCOSA0A1B0GUC4 107 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 FAM220BPB1ANY3 271 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 C5orf58C9J3I9 102 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 FBP2O00757 339 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 TFECO14948 347 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-205ENST00000506880 MAN1A2O60476 641 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF354AO60765 605 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-205ENST00000506880 FMO6PO60774 539 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 UNC5CO95185 931 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 OR12D1P0DN82 309 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 GABRA1P14867 456 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 PCGF2P35227 344 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 CDKN2CP42773 168 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 CLK1P49759 484 aaKnown RBP7.73□□□□□ -1.17
PDGFC-205ENST00000506880 P2RX1P51575 399 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 CASP6P55212 293 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 CDK6Q00534 326 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 PLGLB1Q02325 96 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 FGFBP1Q14512 234 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 EIF2S3LQ2VIR3 472 aaKnown RBP7.73□□□□□ -1.17
PDGFC-205ENST00000506880 NADK2Q4G0N4 442 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 SLC25A53Q5H9E4 307 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 PAGE3Q5JUK9 113 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 FAM219BQ5XKK7 198 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 NANOGP8Q6NSW7 305 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 DHRS4L2Q6PKH6 230 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 SLC2A7Q6PXP3 512 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 ENPP6Q6UWR7 440 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 C5orf46Q6UWT4 87 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 FRRS1Q6ZNA5 592 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 TRPM8Q7Z2W7 1104 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF550Q7Z398 422 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 MDGA2Q7Z553 956 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 CALHM3Q86XJ0 350 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 PGAM4Q8N0Y7 254 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 OR5AK3PQ8NH89 298 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 GRHL3Q8TE85 626 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 SLC38A5Q8WUX1 472 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 MIB2Q96AX9 1013 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 SNRNP40Q96DI7 357 aaKnown RBP7.73□□□□□ -1.17
PDGFC-205ENST00000506880 THOC1Q96FV9 657 aaKnown RBP7.73□□□□□ -1.17
PDGFC-205ENST00000506880 C16orf58Q96GQ5 468 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 TREX2Q9BQ50 279 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-205ENST00000506880 PIGQQ9BRB3 760 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 THUMPD3Q9BV44 507 aaKnown RBP7.73□□□□□ -1.17
PDGFC-205ENST00000506880 TTTY12Q9BZ98 90 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 FAM107BQ9H098 131 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 SLC38A1Q9H2H9 487 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 MMADHCQ9H3L0 296 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-205ENST00000506880 NANOGQ9H9S0 305 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 C12orf10Q9HB07 376 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 PROK2Q9HC23 129 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 KLHL28Q9NXS3 571 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 PPP4R1LQ9P1A2 415 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 BOLA1Q9Y3E2 137 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 L3MBTL1Q9Y468 752 aa7.73□□□□□ -1.17
PDGFC-205ENST00000506880 DIDO1Q9BTC0 2240 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 SMG1Q96Q15 3661 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 HELZ2Q9BYK8 2649 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 A0A1B0GUH1 482 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 ANKUB1A6NFN9 424 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 SERINC4A6NH21 518 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 GJE1A6NN92 205 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 AHRRA9YTQ3 701 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 K7EM74 188 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 FXYD1O00168 92 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF264O43296 627 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 DNPH1O43598 174 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms