RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 GNSP15586 552 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 GLB1P16278 677 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 GIPRP48546 466 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
LIN54-206ENST00000506560 ST3GAL3Q11203 375 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 MINDY4Q4G0A6 757 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 CT45A2Q5DJT8 189 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 PERM1Q5SV97 790 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 SLC30A6Q6NXT4 461 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 ZNF574Q6ZN55 896 aaPredicted RBP11.29□□□□□ -0.6
LIN54-206ENST00000506560 SHISA6Q6ZSJ9 500 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 LAPTM4BQ86VI4 370 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 ZSCAN1Q8NBB4 408 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 OR6C4Q8NGE1 309 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 GRHL3Q8TE85 626 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 ENKD1Q9H0I2 346 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 PNO1Q9NRX1 252 aaKnown RBP11.29□□□□□ -0.6
LIN54-206ENST00000506560 CLEC2DQ9UHP7 191 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 ZNF232Q9UNY5 417 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 SATB2Q9UPW6 733 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 IFT52Q9Y366 437 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 FREM2Q5SZK8 3169 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 CPED1A4D0V7 1026 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 FITM1A5D6W6 292 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 AGR2O95994 175 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 ADORA3P0DMS8 318 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 HSD11B2P80365 405 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 OR1Q1Q15612 314 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 ZNF595Q8IYB9 648 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 UBALD2Q8IYN6 164 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 ALDH16A1Q8IZ83 802 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 STX19Q8N4C7 294 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 IPCEF1Q8WWN9 437 aaPredicted RBP11.29□□□□□ -0.6
LIN54-206ENST00000506560 HOXB13Q92826 284 aaPredicted RBP11.29□□□□□ -0.6
LIN54-206ENST00000506560 HSPBAP1Q96EW2 488 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 CNDP2Q96KP4 475 aaKnown RBP11.29□□□□□ -0.6
LIN54-206ENST00000506560 RNF167Q9H6Y7 350 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 TTC28Q96AY4 2481 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 LY6G6EA0A0G2JKS1 128 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 DUX1O43812 170 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 RFPL3O75679 317 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 LYPD3O95274 346 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 CKMT1AP12532 417 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 ARL4DP49703 201 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 ENTPD1P49961 510 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 EPHA4P54764 986 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 GRM7Q14831 915 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
LIN54-206ENST00000506560 POGLUT1Q8NBL1 392 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 OR4C3Q8NH37 302 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 RAB2BQ8WUD1 216 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 PIGKQ92643 395 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 ABTB1Q969K4 478 aaPredicted RBP11.28□□□□□ -0.6
LIN54-206ENST00000506560 OR10A5Q9H207 317 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 CCNB1IP1Q9NPC3 277 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 U3KQA8 63 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 ADAMTS20P59510 1910 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 C17orf51A8MQB3 221 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 CLDN4O14493 209 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 GNB5O14775 395 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 SLC2A10O95528 541 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 DBIP07108 87 aaKnown RBP11.28□□□□□ -0.6
LIN54-206ENST00000506560 HSMCR30P0CW71 290 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 CDK5Q00535 292 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 TMED1Q13445 227 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 TCTE1Q5JU00 501 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 CASP12Q6UXS9 341 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 ANKRD13BQ86YJ7 626 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 GATSQ8NAP1 163 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 OR4Q3Q8NH05 313 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 PTPMT1Q8WUK0 201 aaPredicted RBP11.28□□□□□ -0.6
LIN54-206ENST00000506560 ACOT11Q8WXI4 607 aaPredicted RBP11.28□□□□□ -0.6
LIN54-206ENST00000506560 FGF11Q92914 225 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 EFHD2Q96C19 240 aaPredicted RBP11.28□□□□□ -0.6
LIN54-206ENST00000506560 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 LMF2Q9BU23 707 aaKnown RBP11.28□□□□□ -0.6
LIN54-206ENST00000506560 DPH1Q9BZG8 443 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 NRSN2Q9GZP1 204 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 RAB33BQ9H082 229 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 SLC25A19Q9HC21 320 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 MRPS33Q9Y291 106 aaKnown RBP11.28□□□□□ -0.6
LIN54-206ENST00000506560 PCNX3Q9H6A9 2034 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 C17orf105B2RV13 164 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 GDF9O60383 454 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 THBS1P07996 1170 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 CD36P16671 472 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 MAKP20794 623 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 SLC15A1P46059 708 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 FXYD6P3P58550 94 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 GARNL3Q5VVW2 1013 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 CD300LDQ6UXZ3 194 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 PRR23CQ6ZRP0 262 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 SHFQ7M4L6 423 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 ZNF615Q8N8J6 731 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 LRR1Q96L50 414 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 GPN2Q9H9Y4 310 aaPredicted RBP11.28□□□□□ -0.6
LIN54-206ENST00000506560 CLN6Q9NWW5 311 aa11.28□□□□□ -0.6
LIN54-206ENST00000506560 A0A1W2PQM1 296 aa11.27□□□□□ -0.61
LIN54-206ENST00000506560 CDC14CA4D256 554 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms