RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 I3L4J1 428 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CHP2O43745 196 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MTX2O75431 263 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 DIRAS3O95661 229 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SNRNP70P08621 437 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 PRR23D2P0DMB1 279 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 GDI1P31150 447 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CLDN20P56880 219 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 OR2B6P58173 313 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 ISL1P61371 349 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 IRF8Q02556 426 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 LCTLQ6UWM7 567 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 C3P1Q6ZMU1 363 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SLC16A13Q7RTY0 426 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 COMMD7Q86VX2 200 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 LDLRAD3Q86YD5 345 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TUSC5Q8IXB3 177 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 PUSL1Q8N0Z8 303 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF843Q8N446 348 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 EMC1Q8N766 993 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 YIPF7Q8N8F6 280 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 RNF152Q8N8N0 203 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 DBF4BQ8NFT6 615 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 OR8D4Q8NGM9 314 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 RTP4Q96DX8 246 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 HYLS1Q96M11 299 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 FER1L6-AS2Q96M78 137 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SELENOSQ9BQE4 189 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SH2D3AQ9BRG2 576 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 UTP23Q9BRU9 249 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 FNDC11Q9BVV2 318 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CHID1Q9BWS9 393 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SPAG4Q9NPE6 437 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SIRT3Q9NTG7 399 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MCUBQ9NWR8 336 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 ARL15Q9NXU5 204 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TAS2R9Q9NYW1 312 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 COX16Q9P0S2 106 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CHRNA9Q9UGM1 479 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TNFRSF18Q9Y5U5 241 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MYH9P35579 1960 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 LOC105371242A0A075B767 164 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 ZCWPW2A0A1B0GU75 182 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 OR2A25A4D2G3 310 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CGB1A6NKQ9 187 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 ERI2A8K979 691 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MYO1GB0I1T2 1018 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SOCS2O14508 198 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TCAPO15273 167 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 LRRTM2O43300 516 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 HUS1O60921 280 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 GADD45GO95257 159 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 ABHD16AO95870 558 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 KNG1P01042 644 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 ATXN1LP0C7T5 689 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TMIGD3P0DMS9 266 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SPP1P10451 314 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 PRG2P13727 222 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 B4GALT1P15291 398 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 XRCC1P18887 633 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 PIGAP37287 484 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 NNMTP40261 264 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 VIPR2P41587 438 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CAPZA1P52907 286 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SLC35A2P78381 396 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 EMX2Q04743 252 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TAB1Q15750 504 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 BCL7AQ4VC05 210 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 ZDHHC20Q5W0Z9 365 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CD276Q5ZPR3 534 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TMEM184AQ6ZMB5 413 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 PELI3Q8N2H9 469 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MINDY1Q8N5J2 469 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SYT8Q8NBV8 401 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 OR5AN1Q8NGI8 311 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SPPL2BQ8TCT7 592 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 DTD1Q8TEA8 209 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TFAP2BQ92481 460 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MCUR1Q96AQ8 359 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 BIRC7Q96CA5 298 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 LRRC39Q96DD0 335 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 APIPQ96GX9 242 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 RDH12Q96NR8 316 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CITED1Q99966 193 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SCRT1Q9BWW7 348 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 FTHL17Q9BXU8 183 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 C11orf54Q9H0W9 315 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 COQ10BQ9H8M1 238 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 LTB4R2Q9NPC1 389 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 C1GALT1Q9NS00 363 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 WNT16Q9UBV4 365 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 NAGKQ9UJ70 344 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 FBXL3Q9UKT7 428 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 PLSCR5A0PG75 271 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MCIDASD6RGH6 385 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TP53I11O14683 189 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 PTGESO14684 152 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 SYNCRIPO60506 623 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 VAMP5O95183 116 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms